Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606772

Identifier: 86606772

GI number: 86606772

Start: 2146709

End: 2147455

Strand: Reverse

Name: 86606772

Synonym: CYA_2132

Alternate gene names: NA

Gene position: 2147455-2146709 (Counterclockwise)

Preceding gene: 86606774

Following gene: 86606766

Centisome position: 73.22

GC content: 63.45

Gene sequence:

>747_bases
TTGTTTCCTACCTCTTGTTCGCCGCCTCTCCAAGAAGAGCCTTCCCTGGCCTCCCAGGGCCCAGTCGGACGGGAGATTCC
CCGTTCTTCTCTGCGAAGGCGGTTTCCCTCTCACCACGCCATCGGGGGAGCGGCGGCTGTGCTGGTGTGCCTACCCGTTT
TTGTGGCAGCGCCCCTGGTGCGCTATAGCCCTTGGCTGAGCTTGGCGATGACTCTAGGCTGGCTGGGCCTTAGCTGGCGG
CTCTACTCGCGGCCCCGCACCCGCATCTGGGGGGATCTGCTCTACGGCTTCACGCTGACTTGGCTGGCAGGATCCTTCTA
CTGGGGCTGGCTGCGCTGGGAGCCCCTCTGGCACATGCCGGTGGAAGCTCTGGGGATCCCGATGGTCTGGTGGGGGGCAC
GGCAACGCTTTGCCCGCATCGGCACCTGGTTCTATCTCGGCTCCTTGTGGGGCACAGCGGTTACAGATCTTTACATTTAC
TCGGTGGGGCTGCTGCCTGAGTGGCGGCAGGCGATGCAGTTTGACCGGTTGGAGCAGGCGGTTGTCCCTTTTAGGGCGGC
CCTCGACAAAATGGCTACCCCCTGGGGCCTGGGTTGGGGCATCGGCTTGGGCCTTCTGTTGCTGGGTGTTGGATTGTGGA
GAGTGCAGGGATCCCGCCGCTTGCACCATTGGGCATTTGCGGGAGCAGTGCTGAATACCCTGTTGGTGGATGGGCTATTC
GGCTGGGGGGCAGCTCTGCTGCGGTGA

Upstream 100 bases:

>100_bases
TTTCGGCAGTACCCTGGCAACGCCGGCCCCTCTCGGCCGGGGCGGGAAAGGGCAGGGAAGATGCTATGTTAACTGATGTA
AAAGTTTCTAAGATTGCGTT

Downstream 100 bases:

>100_bases
GCCAACCACCTCTGCGGTGCTGACCCAGAAAATGGCGGCGCAAGGGACAACATTGAGGCCTGCAGAGGAGCCTGCCTACC
GTTGTTTGGAGTTTCTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFPTSCSPPLQEEPSLASQGPVGREIPRSSLRRRFPSHHAIGGAAAVLVCLPVFVAAPLVRYSPWLSLAMTLGWLGLSWR
LYSRPRTRIWGDLLYGFTLTWLAGSFYWGWLRWEPLWHMPVEALGIPMVWWGARQRFARIGTWFYLGSLWGTAVTDLYIY
SVGLLPEWRQAMQFDRLEQAVVPFRAALDKMATPWGLGWGIGLGLLLLGVGLWRVQGSRRLHHWAFAGAVLNTLLVDGLF
GWGAALLR

Sequences:

>Translated_248_residues
MFPTSCSPPLQEEPSLASQGPVGREIPRSSLRRRFPSHHAIGGAAAVLVCLPVFVAAPLVRYSPWLSLAMTLGWLGLSWR
LYSRPRTRIWGDLLYGFTLTWLAGSFYWGWLRWEPLWHMPVEALGIPMVWWGARQRFARIGTWFYLGSLWGTAVTDLYIY
SVGLLPEWRQAMQFDRLEQAVVPFRAALDKMATPWGLGWGIGLGLLLLGVGLWRVQGSRRLHHWAFAGAVLNTLLVDGLF
GWGAALLR
>Mature_248_residues
MFPTSCSPPLQEEPSLASQGPVGREIPRSSLRRRFPSHHAIGGAAAVLVCLPVFVAAPLVRYSPWLSLAMTLGWLGLSWR
LYSRPRTRIWGDLLYGFTLTWLAGSFYWGWLRWEPLWHMPVEALGIPMVWWGARQRFARIGTWFYLGSLWGTAVTDLYIY
SVGLLPEWRQAMQFDRLEQAVVPFRAALDKMATPWGLGWGIGLGLLLLGVGLWRVQGSRRLHHWAFAGAVLNTLLVDGLF
GWGAALLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28000; Mature: 28000

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure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HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA