Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606731

Identifier: 86606731

GI number: 86606731

Start: 2108029

End: 2109066

Strand: Reverse

Name: 86606731

Synonym: CYA_2091

Alternate gene names: NA

Gene position: 2109066-2108029 (Counterclockwise)

Preceding gene: 86606732

Following gene: 86606729

Centisome position: 71.91

GC content: 54.91

Gene sequence:

>1038_bases
TTGTGGCGCCATTCAGCGACGCTGTTCTCACGGTGGGATCCCGCTAGAGTCATTCCGCAGGCTGACAACATCCCTAATCG
AGAGCGAGGCGATAAGCAAATGTTTCGACGACTCGGTATACCCAGAAGATTTTGGCAACCGGCTGCGCTTGTCCTGGCGG
CAGTGCTTACAGGTTCCCTAACGGTTTTCCTGAAAGGTTGCGGTGGTGGTACCTCCAGCAGCCCCTCGACCGTGGGGTCG
CCGCCAAGGGATCCCGGCTCTGGCTCTGGCTCTACCTCTGCCATTTTGGGATTGGTGGTTGATCCCTTTGCTCAGCTTTG
CCCTTCAGGCTCAACAGCCGCCCTTTGTTCGGGAGGGCCGCTCTTTTCAAGAGGCAATAAGGTTGAGTTGTTCAACCTAA
GCTCAAGAGGGGACATTTTGTTGCCTGCCTTGTCAACCACTGCCTTGGAGGGCAACTTGCGGTTCACCATTCCCTTTTCC
GGATCGATTATTCAACCGCCGGGGAAATTGGTATCGGTTCAGTCCAATCTCCTGGGCCAAGGGCGTCAGTCCGGCCAGCC
TACACCCCTGCGGGGATTTGTTTTCAGCGCAGCCGTGGATGTTTCCCCTTGGAGCGAAGCCCTTTATCGCATCTTGCTGG
GGGAGCGGGATAGAGTACCTTTCTCCAACTTAGCTCCCCCCGAAGTTAGGGATCTGGAGAATATTCTGTTTGTCAGCGTA
CCTCTTTCCAGAACAGCCCGAGACCTGGAGGAAATCATTACGGACATCATTCGACAAGCGGATCAACTTAGTTTTAATCA
GCTTCGCTTTGTGGAGGATCTTATTCGCGTTTGCTATGCCCCAGAAGGCAATCAATCGGATCAGCCCTGCCGCCTCCGCA
TTCCCGTACCCCTACCGCCGGCACCTACGCCGACTCCATTTGTGCCTGCTCCTGAAACTCCCGCTCTTCCCACCATCATC
ACCAACAGAGCTGTTGTTCGTTCAGCATCGGGCTCGTTGCTCTTTAGCAACACGGTTTCGGTGAGGGTAGATAACTGA

Upstream 100 bases:

>100_bases
GAGCACCGCCTGCAGGTGAGGGTGCAAAGCAATGTTCCGCTATCTGCTGGTTCTTATCTTCTCAGTGGCGAGCTGAGAGT
TGAGAGAGAAGGCAGCCGTT

Downstream 100 bases:

>100_bases
TGGCTGCCTCGTTTTAGTCAAGTTTGATGTGAGCTGATTTTGTGTTTCAAGAGAACGCGCTGAGAGAGCCGAGGAGTGTT
GAATGCTGACCTCAAAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MWRHSATLFSRWDPARVIPQADNIPNRERGDKQMFRRLGIPRRFWQPAALVLAAVLTGSLTVFLKGCGGGTSSSPSTVGS
PPRDPGSGSGSTSAILGLVVDPFAQLCPSGSTAALCSGGPLFSRGNKVELFNLSSRGDILLPALSTTALEGNLRFTIPFS
GSIIQPPGKLVSVQSNLLGQGRQSGQPTPLRGFVFSAAVDVSPWSEALYRILLGERDRVPFSNLAPPEVRDLENILFVSV
PLSRTARDLEEIITDIIRQADQLSFNQLRFVEDLIRVCYAPEGNQSDQPCRLRIPVPLPPAPTPTPFVPAPETPALPTII
TNRAVVRSASGSLLFSNTVSVRVDN

Sequences:

>Translated_345_residues
MWRHSATLFSRWDPARVIPQADNIPNRERGDKQMFRRLGIPRRFWQPAALVLAAVLTGSLTVFLKGCGGGTSSSPSTVGS
PPRDPGSGSGSTSAILGLVVDPFAQLCPSGSTAALCSGGPLFSRGNKVELFNLSSRGDILLPALSTTALEGNLRFTIPFS
GSIIQPPGKLVSVQSNLLGQGRQSGQPTPLRGFVFSAAVDVSPWSEALYRILLGERDRVPFSNLAPPEVRDLENILFVSV
PLSRTARDLEEIITDIIRQADQLSFNQLRFVEDLIRVCYAPEGNQSDQPCRLRIPVPLPPAPTPTPFVPAPETPALPTII
TNRAVVRSASGSLLFSNTVSVRVDN
>Mature_345_residues
MWRHSATLFSRWDPARVIPQADNIPNRERGDKQMFRRLGIPRRFWQPAALVLAAVLTGSLTVFLKGCGGGTSSSPSTVGS
PPRDPGSGSGSTSAILGLVVDPFAQLCPSGSTAALCSGGPLFSRGNKVELFNLSSRGDILLPALSTTALEGNLRFTIPFS
GSIIQPPGKLVSVQSNLLGQGRQSGQPTPLRGFVFSAAVDVSPWSEALYRILLGERDRVPFSNLAPPEVRDLENILFVSV
PLSRTARDLEEIITDIIRQADQLSFNQLRFVEDLIRVCYAPEGNQSDQPCRLRIPVPLPPAPTPTPFVPAPETPALPTII
TNRAVVRSASGSLLFSNTVSVRVDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37086; Mature: 37086

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRHSATLFSRWDPARVIPQADNIPNRERGDKQMFRRLGIPRRFWQPAALVLAAVLTGSL
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHCCE
TVFLKGCGGGTSSSPSTVGSPPRDPGSGSGSTSAILGLVVDPFAQLCPSGSTAALCSGGP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC
LFSRGNKVELFNLSSRGDILLPALSTTALEGNLRFTIPFSGSIIQPPGKLVSVQSNLLGQ
CCCCCCEEEEEEECCCCCEEEEECCCEEECCCEEEEEECCCCEECCCCCEEEEHHHHHHC
GRQSGQPTPLRGFVFSAAVDVSPWSEALYRILLGERDRVPFSNLAPPEVRDLENILFVSV
CCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEC
PLSRTARDLEEIITDIIRQADQLSFNQLRFVEDLIRVCYAPEGNQSDQPCRLRIPVPLPP
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
APTPTPFVPAPETPALPTIITNRAVVRSASGSLLFSNTVSVRVDN
CCCCCCCCCCCCCCCCCHHHCCCHHEECCCCCEEEECEEEEEECC
>Mature Secondary Structure
MWRHSATLFSRWDPARVIPQADNIPNRERGDKQMFRRLGIPRRFWQPAALVLAAVLTGSL
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHCCE
TVFLKGCGGGTSSSPSTVGSPPRDPGSGSGSTSAILGLVVDPFAQLCPSGSTAALCSGGP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC
LFSRGNKVELFNLSSRGDILLPALSTTALEGNLRFTIPFSGSIIQPPGKLVSVQSNLLGQ
CCCCCCEEEEEEECCCCCEEEEECCCEEECCCEEEEEECCCCEECCCCCEEEEHHHHHHC
GRQSGQPTPLRGFVFSAAVDVSPWSEALYRILLGERDRVPFSNLAPPEVRDLENILFVSV
CCCCCCCCCCHHEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEEEC
PLSRTARDLEEIITDIIRQADQLSFNQLRFVEDLIRVCYAPEGNQSDQPCRLRIPVPLPP
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCC
APTPTPFVPAPETPALPTIITNRAVVRSASGSLLFSNTVSVRVDN
CCCCCCCCCCCCCCCCCHHHCCCHHEECCCCCEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA