| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606694
Identifier: 86606694
GI number: 86606694
Start: 2073207
End: 2073488
Strand: Reverse
Name: 86606694
Synonym: CYA_2054
Alternate gene names: NA
Gene position: 2073488-2073207 (Counterclockwise)
Preceding gene: 86606695
Following gene: 86606693
Centisome position: 70.7
GC content: 61.35
Gene sequence:
>282_bases ATGAGCTTGGCCATTGTGCGGGTAGAAGAACGGCTCTACACCTTTGAGCAGGCCAGTGAAGTAGCCGGGATCCCGACCCA CCTGCTGGAGTGGCTGCTGTTGCAGGGGCTGGTGGAAGCGCAAAGCAGCTACCTCACCCCCCAACAACTGCGGCGCCTGC TGCAGATGATCCGCCTGCATCGGGACTTGGGCCTCAACTGGGTTGGGGCGGCCATGGTTTTGGATATGGCCCAGGAAATT GCCCGCCTCAGGGCGCAGCTACACTACTACCGCGGAGGCTAA
Upstream 100 bases:
>100_bases TCACGCCCAAATCCCTCTCCCCCACTGAGCGGGATCTCTACGAGAAGCTGCGGCAAAATCGGAGCTGGGATCCCCGCGCC TACTTGCAGGAGGTGAGGCT
Downstream 100 bases:
>100_bases GCAGCCCAAGCCTCCATCTCCCTTAAATCCCGCAAGTCAGGAGAACTTCTCTATGGAACAAGTCGTCCGACGTAGCCAAG TGGTGGGCCTGCTGGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSLAIVRVEERLYTFEQASEVAGIPTHLLEWLLLQGLVEAQSSYLTPQQLRRLLQMIRLHRDLGLNWVGAAMVLDMAQEI ARLRAQLHYYRGG
Sequences:
>Translated_93_residues MSLAIVRVEERLYTFEQASEVAGIPTHLLEWLLLQGLVEAQSSYLTPQQLRRLLQMIRLHRDLGLNWVGAAMVLDMAQEI ARLRAQLHYYRGG >Mature_92_residues SLAIVRVEERLYTFEQASEVAGIPTHLLEWLLLQGLVEAQSSYLTPQQLRRLLQMIRLHRDLGLNWVGAAMVLDMAQEIA RLRAQLHYYRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10718; Mature: 10587
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAIVRVEERLYTFEQASEVAGIPTHLLEWLLLQGLVEAQSSYLTPQQLRRLLQMIRLH CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDLGLNWVGAAMVLDMAQEIARLRAQLHYYRGG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLAIVRVEERLYTFEQASEVAGIPTHLLEWLLLQGLVEAQSSYLTPQQLRRLLQMIRLH CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RDLGLNWVGAAMVLDMAQEIARLRAQLHYYRGG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA