| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606687
Identifier: 86606687
GI number: 86606687
Start: 2066390
End: 2066974
Strand: Reverse
Name: 86606687
Synonym: CYA_2047
Alternate gene names: NA
Gene position: 2066974-2066390 (Counterclockwise)
Preceding gene: 86606688
Following gene: 86606686
Centisome position: 70.48
GC content: 57.61
Gene sequence:
>585_bases ATGAAATTGATCGAAGATATCATCCGATTTTTGGAGACCCGCCTAGAGGAATTCCTCAAAGCCCACCCAGAGATCGAGTT GCAAGCCCTCGACGAGCAGTTGCGCCAGCAGGAAGAAGAAACTCGACGGCTGCGGCAGGAAAGCTTGGCCCAGAAGCAAG CCCTGAGCGAAGCTCTCGCCAAGCTGGGCGAGGAGATCAAGACCTGGCACTTTCGCATCGAAAAAGCCGAGCGGGCCAAC CGCCCCGACCTGGCCGAAGGGGCGCGTCGACGGGAAGCCGAGCTTTTGGAGAAAGGAAGCCGGTTGTTCAACCAAGGGAA GGCTCTGGAGGAGAAAATCCAGCAACTGGAAGCTCTGCTGCCGCAAATTGCCCGGCGCCGCCAAGAGGTGAAAACCAAGC TGCAAGAAGTCAAGGCCGCCCAAGCCAAAACTGCCGCCGAGCCGGCTTGGGGCTTCAGCCCCTGGGGAAAACCGTTTGAG GAAGATAAGTTGGAGGAGGAATTTCGCCGGCTGGAGATGCGGCTAGAGGTAGAGAAGGAATTGCATGACATGAAGAAAAA GGTGGGGGAACAGCAGCGGCGGTAG
Upstream 100 bases:
>100_bases TTTGCTGGTCTAGGCTGCGATCCAACGGGGGCCTATCGGGAACGAGCCGGCTTGCGCTAGCCTAAACGCAACTGAGCGCT CGGCCAGTGAGGATCGGCCC
Downstream 100 bases:
>100_bases CAGCCTGGCCTGTGTCTAAAAAAACTCTGTTAACCTCGAATCCAGTTGCAACAGCCGAACCAAAATCAAGCTGGGTGGAA CCTACGATTTGCGCTCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKLIEDIIRFLETRLEEFLKAHPEIELQALDEQLRQQEEETRRLRQESLAQKQALSEALAKLGEEIKTWHFRIEKAERAN RPDLAEGARRREAELLEKGSRLFNQGKALEEKIQQLEALLPQIARRRQEVKTKLQEVKAAQAKTAAEPAWGFSPWGKPFE EDKLEEEFRRLEMRLEVEKELHDMKKKVGEQQRR
Sequences:
>Translated_194_residues MKLIEDIIRFLETRLEEFLKAHPEIELQALDEQLRQQEEETRRLRQESLAQKQALSEALAKLGEEIKTWHFRIEKAERAN RPDLAEGARRREAELLEKGSRLFNQGKALEEKIQQLEALLPQIARRRQEVKTKLQEVKAAQAKTAAEPAWGFSPWGKPFE EDKLEEEFRRLEMRLEVEKELHDMKKKVGEQQRR >Mature_194_residues MKLIEDIIRFLETRLEEFLKAHPEIELQALDEQLRQQEEETRRLRQESLAQKQALSEALAKLGEEIKTWHFRIEKAERAN RPDLAEGARRREAELLEKGSRLFNQGKALEEKIQQLEALLPQIARRRQEVKTKLQEVKAAQAKTAAEPAWGFSPWGKPFE EDKLEEEFRRLEMRLEVEKELHDMKKKVGEQQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23018; Mature: 23018
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIEDIIRFLETRLEEFLKAHPEIELQALDEQLRQQEEETRRLRQESLAQKQALSEALA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLGEEIKTWHFRIEKAERANRPDLAEGARRREAELLEKGSRLFNQGKALEEKIQQLEALL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH PQIARRRQEVKTKLQEVKAAQAKTAAEPAWGFSPWGKPFEEDKLEEEFRRLEMRLEVEKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LHDMKKKVGEQQRR HHHHHHHHHHHCCC >Mature Secondary Structure MKLIEDIIRFLETRLEEFLKAHPEIELQALDEQLRQQEEETRRLRQESLAQKQALSEALA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLGEEIKTWHFRIEKAERANRPDLAEGARRREAELLEKGSRLFNQGKALEEKIQQLEALL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH PQIARRRQEVKTKLQEVKAAQAKTAAEPAWGFSPWGKPFEEDKLEEEFRRLEMRLEVEKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LHDMKKKVGEQQRR HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA