| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is hmuU [H]
Identifier: 86606673
GI number: 86606673
Start: 2050008
End: 2051051
Strand: Reverse
Name: hmuU [H]
Synonym: CYA_2033
Alternate gene names: 86606673
Gene position: 2051051-2050008 (Counterclockwise)
Preceding gene: 86606674
Following gene: 86606672
Centisome position: 69.94
GC content: 68.68
Gene sequence:
>1044_bases ATGCTGGCCAATCAAGGGCGTCTGTCATCAGGAGTTGACTCGGAGACACGCTGGGGGCAGGCCAGGCGGATCCTCTCCCC GGTCGGCTTGGCGGTTTTGCTACTGAGTGTCATCCTCTTGCTGCTTTGGATCTCGATTGCCTTGGGATCCGTTCCCATGA CTTTTGCGGAGCTGTGGCAGGCCCTGTGGGGGCAAGGGGATCCAGTCCGGCAGACCATTGTCTGGCAGTTGCGGCTGCCG CGGGCACTTTTGGCCCAGTTGCTGGGGGCGGCCTTGGGGATGGCGGGGGCCCTGCTGCAGGGGATGTTGGGCAATGGGCT GGCGGATCCCTACCTGCTGGGCATCTCGGCGGGGGCGGGCCTGGCGGCGGTGGGGCTGCTCACCTGGGGGGAGTGGACGG CTTGGGTGCCCTTGGCGGCTTGGGTGGGCGGGGTGCTGACCACGGTGTTGGTGTATGGCCTGGCGCGCACCCGCTCCGGG CTGGCGGTGGAGCGGCTGATCTTGGCGGGGGTGGCCGTCAGCGCGCTCTTTGGGGCCATTAGCTCCACCTTATTGTTGAT GGCCGATGAGCGGGTGCAGGTGGCCCTGACGTGGTTGATCGGCAGCCTGAGCGGGCGGGGCTGGCCGGAGGTGCGGGTGG CCGGGGTGTACATCCTGGTCGGGCTGGGGCTGGGCTGGGCGCAGGCGCGGGCTTTGAACCTGCTGGGCCTGGGAGAAGAG ATGGCGGTGAGCTTGGGGATCCCGTTGGCGCGGACGCGGGTGGCCATCGGCCTGGTGGCAGCTTTGTTGGCGGCGGCAGC CGTCAGCGTGGGGGGGTTGATCGGCTTTGTGGGGTTGGTGGTGCCCCACATGGTGCGCCAGGGGGTGGGATCGGATCACC GCTGGCTGTTGCCCCTTTCGGCCCTCGGGGGGGCAGCTCTGTTGAGCGGCGCCGATCTCCTCACCCGGCTGGGGGCTGTG GAGCTGCCGGTGGGGATCGTCACGGCGTTGATGGGGGCGCCGTTTTTCGGCTGGCTGCTGCGGCAGCAGGGGGCAGAGCG ATGA
Upstream 100 bases:
>100_bases CAACAAGCTGGAAAGCTTGGCGGGGTTGGGCTCGCTGCTCTGGCGAGCCGGTCGGAGCTGTCTTGCGGATCTCCCCCTCT CAAAAGTCCTGAGGTTTGCG
Downstream 100 bases:
>100_bases GGGAGGGCCGGCCAATTTTGCAGGCCGAGGGGCTGAGCGGGGGCTATGGCTCGCGGCAGGTGATCCATCAGGTGAGCTTC AGCCTGCAGGCGGGGGAATG
Product: iron chelate ABC transporter permease protein
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MLANQGRLSSGVDSETRWGQARRILSPVGLAVLLLSVILLLLWISIALGSVPMTFAELWQALWGQGDPVRQTIVWQLRLP RALLAQLLGAALGMAGALLQGMLGNGLADPYLLGISAGAGLAAVGLLTWGEWTAWVPLAAWVGGVLTTVLVYGLARTRSG LAVERLILAGVAVSALFGAISSTLLLMADERVQVALTWLIGSLSGRGWPEVRVAGVYILVGLGLGWAQARALNLLGLGEE MAVSLGIPLARTRVAIGLVAALLAAAAVSVGGLIGFVGLVVPHMVRQGVGSDHRWLLPLSALGGAALLSGADLLTRLGAV ELPVGIVTALMGAPFFGWLLRQQGAER
Sequences:
>Translated_347_residues MLANQGRLSSGVDSETRWGQARRILSPVGLAVLLLSVILLLLWISIALGSVPMTFAELWQALWGQGDPVRQTIVWQLRLP RALLAQLLGAALGMAGALLQGMLGNGLADPYLLGISAGAGLAAVGLLTWGEWTAWVPLAAWVGGVLTTVLVYGLARTRSG LAVERLILAGVAVSALFGAISSTLLLMADERVQVALTWLIGSLSGRGWPEVRVAGVYILVGLGLGWAQARALNLLGLGEE MAVSLGIPLARTRVAIGLVAALLAAAAVSVGGLIGFVGLVVPHMVRQGVGSDHRWLLPLSALGGAALLSGADLLTRLGAV ELPVGIVTALMGAPFFGWLLRQQGAER >Mature_347_residues MLANQGRLSSGVDSETRWGQARRILSPVGLAVLLLSVILLLLWISIALGSVPMTFAELWQALWGQGDPVRQTIVWQLRLP RALLAQLLGAALGMAGALLQGMLGNGLADPYLLGISAGAGLAAVGLLTWGEWTAWVPLAAWVGGVLTTVLVYGLARTRSG LAVERLILAGVAVSALFGAISSTLLLMADERVQVALTWLIGSLSGRGWPEVRVAGVYILVGLGLGWAQARALNLLGLGEE MAVSLGIPLARTRVAIGLVAALLAAAAVSVGGLIGFVGLVVPHMVRQGVGSDHRWLLPLSALGGAALLSGADLLTRLGAV ELPVGIVTALMGAPFFGWLLRQQGAER
Specific function: Part of the binding-protein-dependent transport system for hemin; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790740, Length=304, Percent_Identity=41.7763157894737, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1790741, Length=336, Percent_Identity=35.7142857142857, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1788004, Length=284, Percent_Identity=38.7323943661972, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1786805, Length=304, Percent_Identity=37.828947368421, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1786804, Length=305, Percent_Identity=36.0655737704918, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1786347, Length=288, Percent_Identity=34.375, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35945; Mature: 35945
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANQGRLSSGVDSETRWGQARRILSPVGLAVLLLSVILLLLWISIALGSVPMTFAELWQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALWGQGDPVRQTIVWQLRLPRALLAQLLGAALGMAGALLQGMLGNGLADPYLLGISAGAG HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH LAAVGLLTWGEWTAWVPLAAWVGGVLTTVLVYGLARTRSGLAVERLILAGVAVSALFGAI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SSTLLLMADERVQVALTWLIGSLSGRGWPEVRVAGVYILVGLGLGWAQARALNLLGLGEE HHHHHHEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH MAVSLGIPLARTRVAIGLVAALLAAAAVSVGGLIGFVGLVVPHMVRQGVGSDHRWLLPLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH ALGGAALLSGADLLTRLGAVELPVGIVTALMGAPFFGWLLRQQGAER HCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MLANQGRLSSGVDSETRWGQARRILSPVGLAVLLLSVILLLLWISIALGSVPMTFAELWQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALWGQGDPVRQTIVWQLRLPRALLAQLLGAALGMAGALLQGMLGNGLADPYLLGISAGAG HHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH LAAVGLLTWGEWTAWVPLAAWVGGVLTTVLVYGLARTRSGLAVERLILAGVAVSALFGAI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH SSTLLLMADERVQVALTWLIGSLSGRGWPEVRVAGVYILVGLGLGWAQARALNLLGLGEE HHHHHHEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH MAVSLGIPLARTRVAIGLVAALLAAAAVSVGGLIGFVGLVVPHMVRQGVGSDHRWLLPLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH ALGGAALLSGADLLTRLGAVELPVGIVTALMGAPFFGWLLRQQGAER HCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]