| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is smtA [C]
Identifier: 86606646
GI number: 86606646
Start: 2019791
End: 2021053
Strand: Reverse
Name: smtA [C]
Synonym: CYA_2003
Alternate gene names: 86606646
Gene position: 2021053-2019791 (Counterclockwise)
Preceding gene: 86606652
Following gene: 86606645
Centisome position: 68.91
GC content: 61.2
Gene sequence:
>1263_bases ATGACCAGATCCGCCCTCTCGGCTGCAGACCGGGCCCTCAGCCTCTACGAGGCTCTGCCCTACCCCAACGTGCCCCTCTC GCAGTCGGCCCGCAATGCCCTGGGGGAGATGTTCAAGATGAGCTATACCACCGCCCAGTACCTACGCACCCACGCCCTCG TCCCGTCCGAGGGCAAGGTGATGCTCAACGCCGGCTGTGGCTCCGGCTGGGAGACGCTGATGATGGCGGAGGCCAATCCG GGCGCCCAGATCGTGGCCTGTGATCTGTCGCCGGCTTCGGTCAAGCTCACCGAGGAACGCCTGCGGCACCACGGCTTCAC CGATGTCCAGTGCTACGTCCTCAACGTGCTGGAGCTGGATCGCCTGGGGATCCAGTTCGATTTCATCAGCCTGAACGATG TTTTGTATTTGTTGGCGGATCCCACTGAGGGCTTGCGGGCGATGAAAAAAGTCCTCAAGCCCGAGGGCATCATTCGCGCC AATCTCCACAGCCGCCGCCAACGCCAGGTGTTTCTCCGCCTGCAGGCAGCTTTGCAAAAGGTGGGGCAATTCGACGTCCC GCCGGCGGTGGGGGCGCAACATGTGCGGGAGTTCATGGGATCCCTGCAGGAAGAGGTGGCCAAGGCGGTGCTGTGGAACC CGGCCAGCTATACCGAAGATGCCGCCATCATGAACAACTATCTGCTCTCCAACGACAAGGGATTCACGATCCCCGAGGTG TTTGGCATGTTGCAGCAGGCGGGGTTGGGCTTTTTAAGCCTGGTGGATATGCCCGACTGGTCGCTGGAGTCTCTCTTTAA GCAAGTGCCGGAGTTTGTGCGGCAACGGCTGGAAACCCTCAGCGTCATGGAGCGGCTGCACCTCTACGAGCTGATCCGGC CTGCCCATCGCCTCATCGACTTTTGGGCCGAGCACGCCGGCTCTTCCCTGGTGCTACCTTGGACGGATGCAGATTGGTTG GCGGGATCCGTGCAATTCAACCCCCTGCTGATGGACAACGCTCGCTTCCACCAGGAGTACAACAAGGCCCTGCAAGAGAA CTGCACCTACGAAATGCAGTGGACAGGGGCCACCCACGGGCGGATCCGCATCCCTGCCGAGAAGGTGAAATGGCTGGCCC CGCTGCTGCAGGGGCCAACTCCGGTGGCAAAGCTGATTCAGCGGGTCGTCGAGTTGGGATCCCTGACGGAAGAACAGGCA ACTGACGAGGTGCTGACCTTCCTGACGGCGTTGGAAGACTTTCTATTCGTCATGCTGCAGTAG
Upstream 100 bases:
>100_bases CAGTTCTGAGCGGATCCCTCAACGGCTACACTCAATCATAAATTCATCCTGCCTTTGCATCGACCGCTCTCTCGCTCTCT GTTGAGCTTTTCCTCTGCGT
Downstream 100 bases:
>100_bases AGCCGTTTTCCCGTTCCCGACCAATCCCAACTCCCCTCTCCCTCTGGGAGAGGGGTTGGGGGTGAGGGCAGTGGCGCGGA GTGCCTGGGAAGTGTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTRSALSAADRALSLYEALPYPNVPLSQSARNALGEMFKMSYTTAQYLRTHALVPSEGKVMLNAGCGSGWETLMMAEANP GAQIVACDLSPASVKLTEERLRHHGFTDVQCYVLNVLELDRLGIQFDFISLNDVLYLLADPTEGLRAMKKVLKPEGIIRA NLHSRRQRQVFLRLQAALQKVGQFDVPPAVGAQHVREFMGSLQEEVAKAVLWNPASYTEDAAIMNNYLLSNDKGFTIPEV FGMLQQAGLGFLSLVDMPDWSLESLFKQVPEFVRQRLETLSVMERLHLYELIRPAHRLIDFWAEHAGSSLVLPWTDADWL AGSVQFNPLLMDNARFHQEYNKALQENCTYEMQWTGATHGRIRIPAEKVKWLAPLLQGPTPVAKLIQRVVELGSLTEEQA TDEVLTFLTALEDFLFVMLQ
Sequences:
>Translated_420_residues MTRSALSAADRALSLYEALPYPNVPLSQSARNALGEMFKMSYTTAQYLRTHALVPSEGKVMLNAGCGSGWETLMMAEANP GAQIVACDLSPASVKLTEERLRHHGFTDVQCYVLNVLELDRLGIQFDFISLNDVLYLLADPTEGLRAMKKVLKPEGIIRA NLHSRRQRQVFLRLQAALQKVGQFDVPPAVGAQHVREFMGSLQEEVAKAVLWNPASYTEDAAIMNNYLLSNDKGFTIPEV FGMLQQAGLGFLSLVDMPDWSLESLFKQVPEFVRQRLETLSVMERLHLYELIRPAHRLIDFWAEHAGSSLVLPWTDADWL AGSVQFNPLLMDNARFHQEYNKALQENCTYEMQWTGATHGRIRIPAEKVKWLAPLLQGPTPVAKLIQRVVELGSLTEEQA TDEVLTFLTALEDFLFVMLQ >Mature_419_residues TRSALSAADRALSLYEALPYPNVPLSQSARNALGEMFKMSYTTAQYLRTHALVPSEGKVMLNAGCGSGWETLMMAEANPG AQIVACDLSPASVKLTEERLRHHGFTDVQCYVLNVLELDRLGIQFDFISLNDVLYLLADPTEGLRAMKKVLKPEGIIRAN LHSRRQRQVFLRLQAALQKVGQFDVPPAVGAQHVREFMGSLQEEVAKAVLWNPASYTEDAAIMNNYLLSNDKGFTIPEVF GMLQQAGLGFLSLVDMPDWSLESLFKQVPEFVRQRLETLSVMERLHLYELIRPAHRLIDFWAEHAGSSLVLPWTDADWLA GSVQFNPLLMDNARFHQEYNKALQENCTYEMQWTGATHGRIRIPAEKVKWLAPLLQGPTPVAKLIQRVVELGSLTEEQAT DEVLTFLTALEDFLFVMLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2067c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 47235; Mature: 47104
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSALSAADRALSLYEALPYPNVPLSQSARNALGEMFKMSYTTAQYLRTHALVPSEGKV CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MLNAGCGSGWETLMMAEANPGAQIVACDLSPASVKLTEERLRHHGFTDVQCYVLNVLELD EEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGIQFDFISLNDVLYLLADPTEGLRAMKKVLKPEGIIRANLHSRRQRQVFLRLQAALQK HCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH VGQFDVPPAVGAQHVREFMGSLQEEVAKAVLWNPASYTEDAAIMNNYLLSNDKGFTIPEV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHH FGMLQQAGLGFLSLVDMPDWSLESLFKQVPEFVRQRLETLSVMERLHLYELIRPAHRLID HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAEHAGSSLVLPWTDADWLAGSVQFNPLLMDNARFHQEYNKALQENCTYEMQWTGATHG HHHHHCCCEEEEECCCCCCCCCCEEECCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCC RIRIPAEKVKWLAPLLQGPTPVAKLIQRVVELGSLTEEQATDEVLTFLTALEDFLFVMLQ EEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRSALSAADRALSLYEALPYPNVPLSQSARNALGEMFKMSYTTAQYLRTHALVPSEGKV CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE MLNAGCGSGWETLMMAEANPGAQIVACDLSPASVKLTEERLRHHGFTDVQCYVLNVLELD EEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGIQFDFISLNDVLYLLADPTEGLRAMKKVLKPEGIIRANLHSRRQRQVFLRLQAALQK HCCCEEEEEECCCEEEEEECCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH VGQFDVPPAVGAQHVREFMGSLQEEVAKAVLWNPASYTEDAAIMNNYLLSNDKGFTIPEV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHH FGMLQQAGLGFLSLVDMPDWSLESLFKQVPEFVRQRLETLSVMERLHLYELIRPAHRLID HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAEHAGSSLVLPWTDADWLAGSVQFNPLLMDNARFHQEYNKALQENCTYEMQWTGATHG HHHHHCCCEEEEECCCCCCCCCCEEECCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCC RIRIPAEKVKWLAPLLQGPTPVAKLIQRVVELGSLTEEQATDEVLTFLTALEDFLFVMLQ EEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3041005; 1901865 [H]