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The map label for this gene is ompA [H]

Identifier: 86606634

GI number: 86606634

Start: 2010771

End: 2011592

Strand: Reverse

Name: ompA [H]

Synonym: CYA_1991

Alternate gene names: 86606634

Gene position: 2011592-2010771 (Counterclockwise)

Preceding gene: 86606635

Following gene: 86606633

Centisome position: 68.59

GC content: 62.9

Gene sequence:

>822_bases
TTGCCTGCGATGCCCCGCCCATCGGAACGTGCAACGGTCTTTCTCAATCTCTCGAGTGGGATCCTCCTGGTCGGCAGCGG
CATCTGGGCGGGAATGGTGCTCCCGCAGCCGCTTCAGACCCAACCGCTGCCAGTTCCCCAGCCGCAGGCCAACACGCCGC
CGCTCCTGCCCACCCTGTCTCCACCCCAGGCCAGTCTCCCAGCGGTGAGCCCAGATGCAGATTCACCAAAGGGGAATCCA
AATCACGGCGGCTCCACGGATCTGGAAAGGGAGATTCGAGAACTCCGCCAGCAGGCCATCCAGCTTTTGATCCGCGTTGA
AGAACTGGAGTCGCGGCTGCAACGGCTGTCTTCCCCAGCAGCGGCCCCTGAGCCGAGGCGAGAATCGGCCACCACTGCCG
AGATCGCCCCGGAGGGAGCAAGCGTCCCTGCCCCCACCGCAACGCCGACCCCTACCTCTTTTCAGGTGGGAACCCGAACC
ATTAGCCTGCCGGGCGATCTGCTCTTCGACTTCGACAAGGCCGAGATTCGGCCTGAGGCGGCCTCCCTGTTAGCAGAAGT
GGCCAAATCTTTGCGGGAAATGCCCGGCGCCCGCGTTCAAGTCAACGGCCACACCGACAACATCGGTTCCTTGAACTATA
ACCTCGACCTTTCCCTGCGCCGCGCCAACGCTGTGAAAGACTACTTAGCTAACCTGTTGCCGGAAGACCACCCCATCAGC
TGGACAACCTCTGGCTTTGGCCCCACCCTGCCGGTGGCCGACAACGATACGGAGGAAGGGAGACAGCGAAACCGCCGCGT
GGATCTCATCATCGCCCCCTAG

Upstream 100 bases:

>100_bases
CTAATCCCCTTGGCAAGCTGCGGTCGCCGGATAGGATCGACTCTAGGCGTTGAGTTGAGCCCGGTTTTCGCTCCTCGCCT
GCGCCCATCTAGCCAGAGGT

Downstream 100 bases:

>100_bases
TGGCCCCCCCCAAAGTTGGGGGTTGGCAGGCTTGAACAGCGCCTTAGTCTAGAATCAACTGGTCCGATCCCTGGTGGGGG
CGAGGGCCAAGGCAACAGTC

Product: OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPAMPRPSERATVFLNLSSGILLVGSGIWAGMVLPQPLQTQPLPVPQPQANTPPLLPTLSPPQASLPAVSPDADSPKGNP
NHGGSTDLEREIRELRQQAIQLLIRVEELESRLQRLSSPAAAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRT
ISLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPEDHPIS
WTTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP

Sequences:

>Translated_273_residues
MPAMPRPSERATVFLNLSSGILLVGSGIWAGMVLPQPLQTQPLPVPQPQANTPPLLPTLSPPQASLPAVSPDADSPKGNP
NHGGSTDLEREIRELRQQAIQLLIRVEELESRLQRLSSPAAAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRT
ISLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPEDHPIS
WTTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP
>Mature_272_residues
PAMPRPSERATVFLNLSSGILLVGSGIWAGMVLPQPLQTQPLPVPQPQANTPPLLPTLSPPQASLPAVSPDADSPKGNPN
HGGSTDLEREIRELRQQAIQLLIRVEELESRLQRLSSPAAAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRTI
SLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPEDHPISW
TTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=113, Percent_Identity=36.283185840708, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1788957, Length=140, Percent_Identity=32.8571428571429, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787191, Length=119, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786962, Length=104, Percent_Identity=37.5, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 29301; Mature: 29170

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMPRPSERATVFLNLSSGILLVGSGIWAGMVLPQPLQTQPLPVPQPQANTPPLLPTLS
CCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPQASLPAVSPDADSPKGNPNHGGSTDLEREIRELRQQAIQLLIRVEELESRLQRLSSPA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRTISLPGDLLFDFDKAEIRPEA
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCEEEECCCCEEEECCHHHCCHHH
ASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPEDHPIS
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCE
WTTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP
EEECCCCCCCCCCCCCHHHHHHHCCEEEEEECC
>Mature Secondary Structure 
PAMPRPSERATVFLNLSSGILLVGSGIWAGMVLPQPLQTQPLPVPQPQANTPPLLPTLS
CCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PPQASLPAVSPDADSPKGNPNHGGSTDLEREIRELRQQAIQLLIRVEELESRLQRLSSPA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AAPEPRRESATTAEIAPEGASVPAPTATPTPTSFQVGTRTISLPGDLLFDFDKAEIRPEA
CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCEEEECCCCEEEECCHHHCCHHH
ASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLRRANAVKDYLANLLPEDHPIS
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCE
WTTSGFGPTLPVADNDTEEGRQRNRRVDLIIAP
EEECCCCCCCCCCCCCHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]