| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is psbP
Identifier: 86606589
GI number: 86606589
Start: 1954079
End: 1954609
Strand: Reverse
Name: psbP
Synonym: CYA_1943
Alternate gene names: NA
Gene position: 1954609-1954079 (Counterclockwise)
Preceding gene: 86606590
Following gene: 86606588
Centisome position: 66.65
GC content: 59.51
Gene sequence:
>531_bases GTGTTGTTACTGCTCTGTGTTTGCCTCAGCTTGCTCACCGGTGCCTGCTCCGCAGGCTCTAACTTGCGCGCCTACAGGGA TCCTGGCGGAGCCTTTGCCTTTGCCTATCCCAACGGCATGGTGGCAGTGAACTTGGGGCCAGGGAAAGGGCCAGCGGTGC TTCTGCGCGACTTGGTCTACGAGACGGAGAACGTCAGCCTGATGATTGCCCCCTTTGATAAGGGAGAGACGATTGCCGAT CTGGGTGGCCCGGACGAGGTGGGGCAATTGGTGGCGGAGAAGATCATCGCCCCGGAAGGCTCTGGTCGCTCGACCAAGCT GTTGGCCGCCGAAGCTTTTGAGCGGCAAGGCCGGCCCTACTACCTGTTTGAGTACCAAACCGATATCGGATCCCAGCTCC GCCACGAGGTAGTGACGGTAACCGTGCGCCACCATCGCCTCTATACTCTGACTGCCTCCACCCAAGAATCCCGCTGGCCG CAGGTGCAGGCTGCCTTCAGGAATGTGGGCCATTCTTTGAATGTCTCTTAA
Upstream 100 bases:
>100_bases TTAGGATGATTGAGATGGGTAACCAATCTGAGCGGAGGATCCCGGCATGTCAGCAGCACAAGGTGGGCATCTTGCCCGAT TCGGACAGCGGCTCTCTGGG
Downstream 100 bases:
>100_bases GACTTTTCTCCAAGATTTTTTGAGAATCTTAGCTGCTCTAGGAAGCCTCAGCCAAGGCAGGCCTGATTGCAGAAATTGCA TCAATGCCCAATCCATATAA
Product: photosystem II oxygen evolving complex protein PsbP
Products: NA
Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP QVQAAFRNVGHSLNVS
Sequences:
>Translated_176_residues MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP QVQAAFRNVGHSLNVS >Mature_176_residues MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP QVQAAFRNVGHSLNVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19039; Mature: 19039
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVY CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHH ETENVSLMIAPFDKGETIADLGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPY CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCE YLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWPQVQAAFRNVGHSLNVS EEEEECCCHHHHHHHEEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVY CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHH ETENVSLMIAPFDKGETIADLGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPY CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCE YLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWPQVQAAFRNVGHSLNVS EEEEECCCHHHHHHHEEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA