Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is psbP

Identifier: 86606589

GI number: 86606589

Start: 1954079

End: 1954609

Strand: Reverse

Name: psbP

Synonym: CYA_1943

Alternate gene names: NA

Gene position: 1954609-1954079 (Counterclockwise)

Preceding gene: 86606590

Following gene: 86606588

Centisome position: 66.65

GC content: 59.51

Gene sequence:

>531_bases
GTGTTGTTACTGCTCTGTGTTTGCCTCAGCTTGCTCACCGGTGCCTGCTCCGCAGGCTCTAACTTGCGCGCCTACAGGGA
TCCTGGCGGAGCCTTTGCCTTTGCCTATCCCAACGGCATGGTGGCAGTGAACTTGGGGCCAGGGAAAGGGCCAGCGGTGC
TTCTGCGCGACTTGGTCTACGAGACGGAGAACGTCAGCCTGATGATTGCCCCCTTTGATAAGGGAGAGACGATTGCCGAT
CTGGGTGGCCCGGACGAGGTGGGGCAATTGGTGGCGGAGAAGATCATCGCCCCGGAAGGCTCTGGTCGCTCGACCAAGCT
GTTGGCCGCCGAAGCTTTTGAGCGGCAAGGCCGGCCCTACTACCTGTTTGAGTACCAAACCGATATCGGATCCCAGCTCC
GCCACGAGGTAGTGACGGTAACCGTGCGCCACCATCGCCTCTATACTCTGACTGCCTCCACCCAAGAATCCCGCTGGCCG
CAGGTGCAGGCTGCCTTCAGGAATGTGGGCCATTCTTTGAATGTCTCTTAA

Upstream 100 bases:

>100_bases
TTAGGATGATTGAGATGGGTAACCAATCTGAGCGGAGGATCCCGGCATGTCAGCAGCACAAGGTGGGCATCTTGCCCGAT
TCGGACAGCGGCTCTCTGGG

Downstream 100 bases:

>100_bases
GACTTTTCTCCAAGATTTTTTGAGAATCTTAGCTGCTCTAGGAAGCCTCAGCCAAGGCAGGCCTGATTGCAGAAATTGCA
TCAATGCCCAATCCATATAA

Product: photosystem II oxygen evolving complex protein PsbP

Products: NA

Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD
LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP
QVQAAFRNVGHSLNVS

Sequences:

>Translated_176_residues
MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD
LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP
QVQAAFRNVGHSLNVS
>Mature_176_residues
MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVYETENVSLMIAPFDKGETIAD
LGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPYYLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWP
QVQAAFRNVGHSLNVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19039; Mature: 19039

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVY
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHH
ETENVSLMIAPFDKGETIADLGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPY
CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCE
YLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWPQVQAAFRNVGHSLNVS
EEEEECCCHHHHHHHEEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLLLCVCLSLLTGACSAGSNLRAYRDPGGAFAFAYPNGMVAVNLGPGKGPAVLLRDLVY
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHH
ETENVSLMIAPFDKGETIADLGGPDEVGQLVAEKIIAPEGSGRSTKLLAAEAFERQGRPY
CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCE
YLFEYQTDIGSQLRHEVVTVTVRHHRLYTLTASTQESRWPQVQAAFRNVGHSLNVS
EEEEECCCHHHHHHHEEEEEEEECEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA