Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606531

Identifier: 86606531

GI number: 86606531

Start: 1889699

End: 1890190

Strand: Reverse

Name: 86606531

Synonym: CYA_1883

Alternate gene names: NA

Gene position: 1890190-1889699 (Counterclockwise)

Preceding gene: 86606533

Following gene: 86606529

Centisome position: 64.45

GC content: 66.26

Gene sequence:

>492_bases
ATGGTATCTAGTCTGGCGGCCCAGGCAGCAACGCTGGTAGAGGAGGCCCCGCAGAACGGGATCCCGACAGCGGCGATGCA
GCAGGTGGCGGAGGTGCTCACCCAGGTGGCCCAACACCTGGATCACCTGCAGTACACCACCTTGCGCTACCCCGATGGTG
GCTGGCTGACGGTGCGGGTGGTGGAAAGCTCCGCCGGGGCGGACTCCCCCCCAGAACCCGAGCCCCCCGGCCATCTGTGG
ATCCCGGCCTTTGGCCACCTGGAAGATGCCCAAGCCACGCTGGCGGAACTTCGGCAGCAAGCGCCGGACTTAGAGGCCAC
CTCCTTTGGGGTTTTGGAGCTGCTGTTTTTGGCCCTGGGCCTTTCCCGCGCCGAAGGCATCGTCTTTTACGACCAGGCAG
GGGATCGGCGGCAAGGGAAAGCCGTGGCCTGCCGACCTCTGGCGGAGCAGGTGAGCCAGGCCCTCCGCAGAGGCCTTCCT
CCCATAGCCTAA

Upstream 100 bases:

>100_bases
GCAACTTCCGCCGTGACAGGGCGGTGCTCTAACCAATTGAACTACAGCCCCAGGAGCTGCGAATACCTATTCTGAACTTA
GATGAGGATGGTTGTCAATC

Downstream 100 bases:

>100_bases
GGCGGGAACGGATCTGCTCTAGCTCAAGATGGCACCCTGGCGGCGGGCGAACTCCCGCAGCTTCCTATCCATCTGTGCCC
CTCGCAGATCCGCTTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MVSSLAAQAATLVEEAPQNGIPTAAMQQVAEVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVESSAGADSPPEPEPPGHLW
IPAFGHLEDAQATLAELRQQAPDLEATSFGVLELLFLALGLSRAEGIVFYDQAGDRRQGKAVACRPLAEQVSQALRRGLP
PIA

Sequences:

>Translated_163_residues
MVSSLAAQAATLVEEAPQNGIPTAAMQQVAEVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVESSAGADSPPEPEPPGHLW
IPAFGHLEDAQATLAELRQQAPDLEATSFGVLELLFLALGLSRAEGIVFYDQAGDRRQGKAVACRPLAEQVSQALRRGLP
PIA
>Mature_163_residues
MVSSLAAQAATLVEEAPQNGIPTAAMQQVAEVLTQVAQHLDHLQYTTLRYPDGGWLTVRVVESSAGADSPPEPEPPGHLW
IPAFGHLEDAQATLAELRQQAPDLEATSFGVLELLFLALGLSRAEGIVFYDQAGDRRQGKAVACRPLAEQVSQALRRGLP
PIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17428; Mature: 17428

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSLAAQAATLVEEAPQNGIPTAAMQQVAEVLTQVAQHLDHLQYTTLRYPDGGWLTVRV
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE
VESSAGADSPPEPEPPGHLWIPAFGHLEDAQATLAELRQQAPDLEATSFGVLELLFLALG
EECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LSRAEGIVFYDQAGDRRQGKAVACRPLAEQVSQALRRGLPPIA
HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSSLAAQAATLVEEAPQNGIPTAAMQQVAEVLTQVAQHLDHLQYTTLRYPDGGWLTVRV
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEE
VESSAGADSPPEPEPPGHLWIPAFGHLEDAQATLAELRQQAPDLEATSFGVLELLFLALG
EECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LSRAEGIVFYDQAGDRRQGKAVACRPLAEQVSQALRRGLPPIA
HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA