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The map label for this gene is etfD [H]

Identifier: 86606350

GI number: 86606350

Start: 1694021

End: 1695745

Strand: Reverse

Name: etfD [H]

Synonym: CYA_1694

Alternate gene names: 86606350

Gene position: 1695745-1694021 (Counterclockwise)

Preceding gene: 86606353

Following gene: 86606349

Centisome position: 57.82

GC content: 61.04

Gene sequence:

>1725_bases
ATGAGTGACGCCATCCGCTACGACCTGCTTTTGGTGGGGGGGAGCTCCTCCAACCTGATCCTGGCCCATCGCCTTTTGGA
TCTGGCCAAGCTCTCGGGGCTCAAGCTCTCCATCGCCCTTTTGGAAAAAGCCCGGCAATTCGGCGGGCACATCATCAGTG
GTGCCATCTGCAATCCCCAGGTAATCGCCAGGCTTTTCCCGGATTTTGAGAGCCAAGGATTTCCCCACGAGGGGCGGGTG
GAGGTGAGCCACCTGAGCATATTGGGATCCCAGGAACGGTGGGACTTGCCAGAGGCAGTGATCCCAAAGGGGTTGCGCAA
ACAGGGGCAGCTCATCCTCACCCTCAGCCATGTCATTCGCTGGCTAGCCGAAACCCTACAAGAAAAGGCTAAAGGGATCC
CCAACGTCACCCTGGACGTATTCCCTGGCTTTGCCGCCCATGAGATCCTCTATGAGGGGGAGCGAGTCATTGGGGTGCGG
GTGAGCGACTCCGGCCAGGTTTATGAAGACTGTGTCTTTGCCGAGCTCACTTGTTTTGGCGACAAGGGGTTTATCTCTAA
GGACCTGATCGAAAGATTTCACCTGCGCCCCCGCCCGCAACTGTGGTCAGTGGGGGTCAAGGAGCTGTGGCAGATTCCTG
GCTCACTGCAGGGGCAGGTGTGGCATACCCTGGGCTACCCGGTTTTGGATGGCAGCTTCAGCGGCGGCTTTGTCTACGGC
CTCAAAGATAACCGCCTGGCCCTGGGCTTGATCATCGGCCTCGACAGCAAAAACCCCAACCTCAACCCGCAGCAGCGCCT
GCAGGAGTTCAAGGCCCACCCCTGGATCCAGTCCCTCATTGCCGGCGGCAAGTTGCTCAAATATGGGGCTGCCGTCATTC
CTGAGGGGGGCTACTACAGCTTGCCCAGCCGCTTTGGCGTCGAAGGGGCTTTGCTTTTGGGCGATGCCCTGGGGGTGCTG
GATGTGGGCAGCCTGGCCGGGATCAACAACGCCATGGAGACCGGCTACCTAGCAGCGGGCCTCATTCACGACGGCTTCTT
GAAAGGAGATCTGCGGATCCAAGAGGCCTACCAAAAGGCGGTGATGGAGAGCTCCGTTGGCCAAGATCTCTACCGTAGCC
GCTACTTCCGGGAGGCCTTTTTGGAAAACTCCCGTCTGCTGGAAGCGTACCTGCCCCAGATCTGCCGCAGCGTGGATGCC
GGCCACCCTTGGCTGGGATCCCTGCGCTGGGGCCTCCAGGATCCCGTGCGTCGCGGCAGGGAACTCCTGCGTGCCTATAC
CCTGCTGACGGGACGGGTCAGCGCCAGCGAGCCACCCCCACGGGGATATGTGGCCCCCCATGCCGCCATCCAGGCGGACT
TTGTGGCCCCCAGCGTTGTGGATCCCGAAACATTGACCACGCGAGCGGGCTATTTCTCGCGATCCGATGCCGTCTTTTTT
GCGGATCCCCGCTACCCCGAAGGCAACCGGCACATCCTCGAGTTCAGCGCCGAGATCTGCCGCCAGTGCATTGCCACCTA
CGACAAGCTCAACCGCCCCACCCCCTGCGTGGCCGATTGCACCGCGGAAGTCCACCACATCCGCGAGCAAAACGGCATCC
GCTCCCACGCCATGGCTTTGGAAAACTGCATCCAGTGCCGCACCTGCGAGATCGTCTGCCCCCACTTAAACCTGCGGGTT
AACCCCAGCTACGAGGGATCCGGCCCCGACTTTTATGGGCTCTAG

Upstream 100 bases:

>100_bases
CGCCCAAAGCCTTGAGAAGGTCTAAAGTTTTGGGATCTTTCCACTTTTCCTTTCTAGGATACGGGCAGACTCTCCAGAGC
CACTGGGTGGGGAATTTTGC

Downstream 100 bases:

>100_bases
CCGAGCTGTGGCCAGCGAAATAGGGGCTCAGCCTTGCTGGCATTATTGACGTTCTCTCCAGGGCCCCCCGTAGACGGGGG
GTTGGGGAGGACGCCATAAC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 574; Mature: 573

Protein sequence:

>574_residues
MSDAIRYDLLLVGGSSSNLILAHRLLDLAKLSGLKLSIALLEKARQFGGHIISGAICNPQVIARLFPDFESQGFPHEGRV
EVSHLSILGSQERWDLPEAVIPKGLRKQGQLILTLSHVIRWLAETLQEKAKGIPNVTLDVFPGFAAHEILYEGERVIGVR
VSDSGQVYEDCVFAELTCFGDKGFISKDLIERFHLRPRPQLWSVGVKELWQIPGSLQGQVWHTLGYPVLDGSFSGGFVYG
LKDNRLALGLIIGLDSKNPNLNPQQRLQEFKAHPWIQSLIAGGKLLKYGAAVIPEGGYYSLPSRFGVEGALLLGDALGVL
DVGSLAGINNAMETGYLAAGLIHDGFLKGDLRIQEAYQKAVMESSVGQDLYRSRYFREAFLENSRLLEAYLPQICRSVDA
GHPWLGSLRWGLQDPVRRGRELLRAYTLLTGRVSASEPPPRGYVAPHAAIQADFVAPSVVDPETLTTRAGYFSRSDAVFF
ADPRYPEGNRHILEFSAEICRQCIATYDKLNRPTPCVADCTAEVHHIREQNGIRSHAMALENCIQCRTCEIVCPHLNLRV
NPSYEGSGPDFYGL

Sequences:

>Translated_574_residues
MSDAIRYDLLLVGGSSSNLILAHRLLDLAKLSGLKLSIALLEKARQFGGHIISGAICNPQVIARLFPDFESQGFPHEGRV
EVSHLSILGSQERWDLPEAVIPKGLRKQGQLILTLSHVIRWLAETLQEKAKGIPNVTLDVFPGFAAHEILYEGERVIGVR
VSDSGQVYEDCVFAELTCFGDKGFISKDLIERFHLRPRPQLWSVGVKELWQIPGSLQGQVWHTLGYPVLDGSFSGGFVYG
LKDNRLALGLIIGLDSKNPNLNPQQRLQEFKAHPWIQSLIAGGKLLKYGAAVIPEGGYYSLPSRFGVEGALLLGDALGVL
DVGSLAGINNAMETGYLAAGLIHDGFLKGDLRIQEAYQKAVMESSVGQDLYRSRYFREAFLENSRLLEAYLPQICRSVDA
GHPWLGSLRWGLQDPVRRGRELLRAYTLLTGRVSASEPPPRGYVAPHAAIQADFVAPSVVDPETLTTRAGYFSRSDAVFF
ADPRYPEGNRHILEFSAEICRQCIATYDKLNRPTPCVADCTAEVHHIREQNGIRSHAMALENCIQCRTCEIVCPHLNLRV
NPSYEGSGPDFYGL
>Mature_573_residues
SDAIRYDLLLVGGSSSNLILAHRLLDLAKLSGLKLSIALLEKARQFGGHIISGAICNPQVIARLFPDFESQGFPHEGRVE
VSHLSILGSQERWDLPEAVIPKGLRKQGQLILTLSHVIRWLAETLQEKAKGIPNVTLDVFPGFAAHEILYEGERVIGVRV
SDSGQVYEDCVFAELTCFGDKGFISKDLIERFHLRPRPQLWSVGVKELWQIPGSLQGQVWHTLGYPVLDGSFSGGFVYGL
KDNRLALGLIIGLDSKNPNLNPQQRLQEFKAHPWIQSLIAGGKLLKYGAAVIPEGGYYSLPSRFGVEGALLLGDALGVLD
VGSLAGINNAMETGYLAAGLIHDGFLKGDLRIQEAYQKAVMESSVGQDLYRSRYFREAFLENSRLLEAYLPQICRSVDAG
HPWLGSLRWGLQDPVRRGRELLRAYTLLTGRVSASEPPPRGYVAPHAAIQADFVAPSVVDPETLTTRAGYFSRSDAVFFA
DPRYPEGNRHILEFSAEICRQCIATYDKLNRPTPCVADCTAEVHHIREQNGIRSHAMALENCIQCRTCEIVCPHLNLRVN
PSYEGSGPDFYGL

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=596, Percent_Identity=28.5234899328859, Blast_Score=195, Evalue=9e-50,
Organism=Escherichia coli, GI1787991, Length=424, Percent_Identity=27.8301886792453, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1786227, Length=423, Percent_Identity=26.4775413711584, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI87082155, Length=321, Percent_Identity=29.2834890965732, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=605, Percent_Identity=27.7685950413223, Blast_Score=201, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6324932, Length=612, Percent_Identity=28.1045751633987, Blast_Score=187, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24652256, Length=597, Percent_Identity=29.3132328308208, Blast_Score=202, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 63395; Mature: 63264

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAIRYDLLLVGGSSSNLILAHRLLDLAKLSGLKLSIALLEKARQFGGHIISGAICNPQ
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCEEEECCCCCHH
VIARLFPDFESQGFPHEGRVEVSHLSILGSQERWDLPEAVIPKGLRKQGQLILTLSHVIR
HHHHHCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCHHHHCCCCEEEEHHHHHH
WLAETLQEKAKGIPNVTLDVFPGFAAHEILYEGERVIGVRVSDSGQVYEDCVFAELTCFG
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHEEEEEC
DKGFISKDLIERFHLRPRPQLWSVGVKELWQIPGSLQGQVWHTLGYPVLDGSFSGGFVYG
CCCCHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCEEECCCCEEECCCCCCCEEEE
LKDNRLALGLIIGLDSKNPNLNPQQRLQEFKAHPWIQSLIAGGKLLKYGAAVIPEGGYYS
ECCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCEECCCCCCCC
LPSRFGVEGALLLGDALGVLDVGSLAGINNAMETGYLAAGLIHDGFLKGDLRIQEAYQKA
CCHHCCCCEEEEHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VMESSVGQDLYRSRYFREAFLENSRLLEAYLPQICRSVDAGHPWLGSLRWGLQDPVRRGR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH
ELLRAYTLLTGRVSASEPPPRGYVAPHAAIQADFVAPSVVDPETLTTRAGYFSRSDAVFF
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHHCCCCCCCCEEEE
ADPRYPEGNRHILEFSAEICRQCIATYDKLNRPTPCVADCTAEVHHIREQNGIRSHAMAL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
ENCIQCRTCEIVCPHLNLRVNPSYEGSGPDFYGL
HHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SDAIRYDLLLVGGSSSNLILAHRLLDLAKLSGLKLSIALLEKARQFGGHIISGAICNPQ
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCEEEECCCCCHH
VIARLFPDFESQGFPHEGRVEVSHLSILGSQERWDLPEAVIPKGLRKQGQLILTLSHVIR
HHHHHCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCHHHHCCCCEEEEHHHHHH
WLAETLQEKAKGIPNVTLDVFPGFAAHEILYEGERVIGVRVSDSGQVYEDCVFAELTCFG
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHEEEEEC
DKGFISKDLIERFHLRPRPQLWSVGVKELWQIPGSLQGQVWHTLGYPVLDGSFSGGFVYG
CCCCHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCEEECCCCEEECCCCCCCEEEE
LKDNRLALGLIIGLDSKNPNLNPQQRLQEFKAHPWIQSLIAGGKLLKYGAAVIPEGGYYS
ECCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCCEECCCCCCCC
LPSRFGVEGALLLGDALGVLDVGSLAGINNAMETGYLAAGLIHDGFLKGDLRIQEAYQKA
CCHHCCCCEEEEHHCHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
VMESSVGQDLYRSRYFREAFLENSRLLEAYLPQICRSVDAGHPWLGSLRWGLQDPVRRGR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHH
ELLRAYTLLTGRVSASEPPPRGYVAPHAAIQADFVAPSVVDPETLTTRAGYFSRSDAVFF
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHHCCCCCCCCEEEE
ADPRYPEGNRHILEFSAEICRQCIATYDKLNRPTPCVADCTAEVHHIREQNGIRSHAMAL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
ENCIQCRTCEIVCPHLNLRVNPSYEGSGPDFYGL
HHHHCCCEEEEECCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9294455 [H]