Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606340

Identifier: 86606340

GI number: 86606340

Start: 1684079

End: 1684966

Strand: Reverse

Name: 86606340

Synonym: CYA_1684

Alternate gene names: NA

Gene position: 1684966-1684079 (Counterclockwise)

Preceding gene: 86606341

Following gene: 86606335

Centisome position: 57.45

GC content: 59.23

Gene sequence:

>888_bases
TTGAACTGGTGGCGATCTTCTGCGGCTCCCTCGTCTGAGTCCGACCCTCGACCGGAACCCCAGGGACAGAATAACTATCT
GCTGATCGTTCTCGACAGTTGCCGTTTCGACAGCCTGCTGGCCGCCAACCCCAAGCATCTGCTCAAGCTGGGATCCCTGG
AAAAGCGCTGGAGCTACGCTTCCTGGACGGCTCCCGCCCACTACAACCTGCTCATGGGCCTGCTGCCCCACACCAGCCCC
ACCCAGGTTTTCGCGTCTGAACACTACAAGCAGGAATATTTGCGCTACAACGAGCGCCTCGGTACCCGGCAGCCGATCGA
GTTCAAGCATCTGCTGCCCCACCTCTATTTGCCGACGCTACTGAAGCACCAACTGGGCTACACCACCCACGCCATGGTCT
CCCTGCCGGTGCTCAACCCCAGCACCCTGCTCAACCGCGACTTCGATTCCTACCGCCTCATGCCGCGCCACAACGACATG
GCAGCCATGGTGGAGCAGTTGCGCTTTGATCCGGATCGCCCCAGCTTTTACCTGTTGAATGTGGGCGAAACTCACTATCC
CTACGCCCTGCCCGATGAGGATCCCAGCCTGTGGCCCCGCATCTCTGGGGTGAATGGCGTGTTAAAGCGCCTGGATGAAG
GGGAAGAGGCCGGGATCCCCTTTTTCAGCGCCGCCCAGTTGGAGGAGCTGCGCCAGCGGCAGATCGAGGCGGTGCGCTAC
CTAGATGGGGTTTTTGAACAATTGTTCGATCTGGTTCCCAAAAACACCTACATCACCGTTACCGCCGACCACGGCGAATT
GTTCGGGGAAGGGGGCTATTTTGGCCATGGCCCCATCCACCACGAAAAGGTGCTGGAGGTGCCTTTTATCGAGGGAAAAA
TTCGCTGA

Upstream 100 bases:

>100_bases
CTGAGGAAGAACTTGAGGAGGAAGACGACGCGGCCACAGCCCCCAACTGGCGGATCGTCCGACGGCCCTATTCTGCCCAG
GAGGAAGAGGAATGGGACTC

Downstream 100 bases:

>100_bases
GGCCCTCACCCCCGGCCCCTCTCCCAAAGGGAGAGGGGAGATACGGATTCGGGTTCGGCTCCGCTTGGAACGTCAGCACG
CTAAACCTGTTGGGTCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNWWRSSAAPSSESDPRPEPQGQNNYLLIVLDSCRFDSLLAANPKHLLKLGSLEKRWSYASWTAPAHYNLLMGLLPHTSP
TQVFASEHYKQEYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSLPVLNPSTLLNRDFDSYRLMPRHNDM
AAMVEQLRFDPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEAGIPFFSAAQLEELRQRQIEAVRY
LDGVFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR

Sequences:

>Translated_295_residues
MNWWRSSAAPSSESDPRPEPQGQNNYLLIVLDSCRFDSLLAANPKHLLKLGSLEKRWSYASWTAPAHYNLLMGLLPHTSP
TQVFASEHYKQEYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSLPVLNPSTLLNRDFDSYRLMPRHNDM
AAMVEQLRFDPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEAGIPFFSAAQLEELRQRQIEAVRY
LDGVFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
>Mature_295_residues
MNWWRSSAAPSSESDPRPEPQGQNNYLLIVLDSCRFDSLLAANPKHLLKLGSLEKRWSYASWTAPAHYNLLMGLLPHTSP
TQVFASEHYKQEYLRYNERLGTRQPIEFKHLLPHLYLPTLLKHQLGYTTHAMVSLPVLNPSTLLNRDFDSYRLMPRHNDM
AAMVEQLRFDPDRPSFYLLNVGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEAGIPFFSAAQLEELRQRQIEAVRY
LDGVFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33924; Mature: 33924

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWWRSSAAPSSESDPRPEPQGQNNYLLIVLDSCRFDSLLAANPKHLLKLGSLEKRWSYA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHCCHHHHCCCC
SWTAPAHYNLLMGLLPHTSPTQVFASEHYKQEYLRYNERLGTRQPIEFKHLLPHLYLPTL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LKHQLGYTTHAMVSLPVLNPSTLLNRDFDSYRLMPRHNDMAAMVEQLRFDPDRPSFYLLN
HHHHHCCCEEEEEEEECCCHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCCCCEEEEE
VGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEAGIPFFSAAQLEELRQRQIEAVRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LDGVFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
HHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MNWWRSSAAPSSESDPRPEPQGQNNYLLIVLDSCRFDSLLAANPKHLLKLGSLEKRWSYA
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHCCHHHHCCCC
SWTAPAHYNLLMGLLPHTSPTQVFASEHYKQEYLRYNERLGTRQPIEFKHLLPHLYLPTL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LKHQLGYTTHAMVSLPVLNPSTLLNRDFDSYRLMPRHNDMAAMVEQLRFDPDRPSFYLLN
HHHHHCCCEEEEEEEECCCHHHHHHCCCHHEECCCCCCHHHHHHHHHHCCCCCCCEEEEE
VGETHYPYALPDEDPSLWPRISGVNGVLKRLDEGEEAGIPFFSAAQLEELRQRQIEAVRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LDGVFEQLFDLVPKNTYITVTADHGELFGEGGYFGHGPIHHEKVLEVPFIEGKIR
HHHHHHHHHHHCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA