Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86606294

Identifier: 86606294

GI number: 86606294

Start: 1635933

End: 1636400

Strand: Reverse

Name: 86606294

Synonym: CYA_1634

Alternate gene names: NA

Gene position: 1636400-1635933 (Counterclockwise)

Preceding gene: 86606300

Following gene: 86606293

Centisome position: 55.8

GC content: 57.69

Gene sequence:

>468_bases
ATGGTCTACAGCGAGCCGCTCATCGACCGTTCTCCAGAAGGTTTTCCAGGCCTGATGGAAGAGCCCCCTCGCTACGTTGA
AGTTGTCTCAGCAGTAGTTTCCAGCCTCAAAGAAGATGCCGCCTACGAGAACCACGAGCAGGGCCACACCTGGAAATTCA
CCTACGGCAGCGTGGAAGTGTTCGTCCACCTGAGCGGCGAATCCCCCGAAGATACCCTGTTGGTGTGGTCTCCCGTGCTC
TCTCTGCCGGTGGCGGAGCCGGCTAAGCTCATGCAGAAGCTGCTGGAGAAAAACTGGAGCGAAACTCTGGAAGCCCGTTT
TTGCATCTGGAACAACCAAGTGGTGCTAAACCACCACCGCACTCTGGAAGGGCTCAGCGCTGGCGAGATCTCGCGCGCCA
TCACCCTTGTGGCCAGCTTGGCCGATGAGTACGATGAGCAGCTCCAGGCTGAGTTTCCCAAAGCTTGA

Upstream 100 bases:

>100_bases
AGTTCTATTCTGGCCTGAGCCGGATCCGGCAGCATGGCAGGTAGGTGGGAGGGCTAGGCAGTATAGTTAAGGTGGTTAGA
CAGGGAGTAGGGGAAAGACC

Downstream 100 bases:

>100_bases
TGGGATCCCAGGGCTCTTGGCTGCCCTATCGCGTGGCCGCTGGCGGCTGGCAGATGGAGCAGGACTTTTGGCTTTTGCAG
CGGCTGCGCCAGGATCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MVYSEPLIDRSPEGFPGLMEEPPRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGSVEVFVHLSGESPEDTLLVWSPVL
SLPVAEPAKLMQKLLEKNWSETLEARFCIWNNQVVLNHHRTLEGLSAGEISRAITLVASLADEYDEQLQAEFPKA

Sequences:

>Translated_155_residues
MVYSEPLIDRSPEGFPGLMEEPPRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGSVEVFVHLSGESPEDTLLVWSPVL
SLPVAEPAKLMQKLLEKNWSETLEARFCIWNNQVVLNHHRTLEGLSAGEISRAITLVASLADEYDEQLQAEFPKA
>Mature_155_residues
MVYSEPLIDRSPEGFPGLMEEPPRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGSVEVFVHLSGESPEDTLLVWSPVL
SLPVAEPAKLMQKLLEKNWSETLEARFCIWNNQVVLNHHRTLEGLSAGEISRAITLVASLADEYDEQLQAEFPKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17442; Mature: 17442

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYSEPLIDRSPEGFPGLMEEPPRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGSVEV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEE
FVHLSGESPEDTLLVWSPVLSLPVAEPAKLMQKLLEKNWSETLEARFCIWNNQVVLNHHR
EEEECCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHCCHHHHHHHHEEEECCEEEEECCC
TLEGLSAGEISRAITLVASLADEYDEQLQAEFPKA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVYSEPLIDRSPEGFPGLMEEPPRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGSVEV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEE
FVHLSGESPEDTLLVWSPVLSLPVAEPAKLMQKLLEKNWSETLEARFCIWNNQVVLNHHR
EEEECCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHCCHHHHHHHHEEEECCEEEEECCC
TLEGLSAGEISRAITLVASLADEYDEQLQAEFPKA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA