| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ygcG [H]
Identifier: 86606292
GI number: 86606292
Start: 1633707
End: 1634978
Strand: Reverse
Name: ygcG [H]
Synonym: CYA_1632
Alternate gene names: 86606292
Gene position: 1634978-1633707 (Counterclockwise)
Preceding gene: 86606293
Following gene: 86606291
Centisome position: 55.75
GC content: 59.51
Gene sequence:
>1272_bases GTGCCCAACCCCCGCCGTCAGTATGGAGGGTGGGTTTCCGATACCGCCAACATCCTCAGCAGCAGCACCGAAAACGAGCT CAACCGTCTTATCACTCAGCTTGAGCAGCGCACCAGTGCCGAGATGGCAGTGGTTACCGTGCCGAATACTCAGGGATATG CAACACCAAAAGACTTCACCACGCAGCTATTTAACTACTGGGGGATCGGCAAGGCAGGCCAAAACAACGGGGTTTTGTTT CTCATCTCGGTAGGGGATCGGCGGGTGGAAATCGAAACGGGCAGGGGCCTGGTCGCTATCCTCCCCGACAGCCGAGTCCA GCAGATTATCGACCAGCAGATCCTGCCTCGGTTTCGCAATGGGGATTTTGATGGCGGCACTCTGGCGGGGGTGCGGCAGT TGACCTCGGTGTTGCAGGGCCAGCCCGTTGCCAATGTTCCTGCGGCAGCTTCTGAAGTTACCACCTCAACGATTGCAACT TCTTCTGGGGCAGTGGCCCAGGGCATTGATTCTTCCCTGGTGGAAGGGATCCTGCTGCTGCTGGGGATCATCCTTTTGGG ACTGGGGTGGCAGCGCTCTCGCATGCCCGTCTCTCTAAGGGCTGAGCGAGGGGGAAGACAAGTCCTCTCCCTGACACGCA GAGATCCAAGAACAGGTGCTGTGCTCTCTTCGGTTCAGAGCGACCCCATTCGTCTCTTCCTCTATTCGGGATCCCTCTGC CTTGGCCTGTTCCTAGGATTGTCCAGCGGCACTTGGCTGGGGTTGGCTTTGCCGGTTGTGGCTGCTTTGGCCACTGACGG CACCTTGGGCCGGAAGCGTGGGATCCCCTTTCAGCCCGTGGTCTGCCAAAGCTGCGGTCGACCCATGCGCCCCATCCAGG CGCAAGTTCTCGATACGTGCCTCTCCCCGGGAGATCGCTTAGCCAAAAGCCGGGGCAGAGCCAGCTACTACGGCTGGTTT TGCCCTAGCTGTCAGGGGGCAGCTGTGGTTGTTCGCGAGAATGGATTTTATCGCCACCTCTATTGCCCCCGGTGTCAAGC TCTCACCCTCGACCTCACCACCCAGGTTCTCAGGGAAGCCACCTATTCCTCTAGCGGCTTGAAGCTGGAAATCCTGAGCT GTCCTATCTGCGGGTACCGCAGCGAGCGAGAGGTGGTCATCCCCGAGCTCAGCGACACAGACACAGATTCAGACTTCGGT GGAGATTCAGGTGGAGATTCAGACTTCGGGGGCGGCAGCAGCGGAGGTGGCGGAGCGGGCGGCAGTTGGTGA
Upstream 100 bases:
>100_bases GCAGCGCTCAGCCAGGTAAGCCATGCCGAAAGTTTGGGCGGCAGTTTTGCTAGTTGTATCCCTGCTGCCGCAGCCCGCTT GGGCCATTACCCTTGAACAA
Downstream 100 bases:
>100_bases GACCTGACTCTAGGGATTTCTCTATGGATTGAACAAGGGAGTTGGGCTTTTCCTCAGTCCGCCAGGGCAGTACAGTGGTA AGGGAGCAGCGATAGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQLFNYWGIGKAGQNNGVLF LISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQPVANVPAAASEVTTSTIAT SSGAVAQGIDSSLVEGILLLLGIILLGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVLSSVQSDPIRLFLYSGSLC LGLFLGLSSGTWLGLALPVVAALATDGTLGRKRGIPFQPVVCQSCGRPMRPIQAQVLDTCLSPGDRLAKSRGRASYYGWF CPSCQGAAVVVRENGFYRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFG GDSGGDSDFGGGSSGGGGAGGSW
Sequences:
>Translated_423_residues MPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQLFNYWGIGKAGQNNGVLF LISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQPVANVPAAASEVTTSTIAT SSGAVAQGIDSSLVEGILLLLGIILLGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVLSSVQSDPIRLFLYSGSLC LGLFLGLSSGTWLGLALPVVAALATDGTLGRKRGIPFQPVVCQSCGRPMRPIQAQVLDTCLSPGDRLAKSRGRASYYGWF CPSCQGAAVVVRENGFYRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFG GDSGGDSDFGGGSSGGGGAGGSW >Mature_422_residues PNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQLFNYWGIGKAGQNNGVLFL ISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQPVANVPAAASEVTTSTIATS SGAVAQGIDSSLVEGILLLLGIILLGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVLSSVQSDPIRLFLYSGSLCL GLFLGLSSGTWLGLALPVVAALATDGTLGRKRGIPFQPVVCQSCGRPMRPIQAQVLDTCLSPGDRLAKSRGRASYYGWFC PSCQGAAVVVRENGFYRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFGG DSGGDSDFGGGSSGGGGAGGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=130, Percent_Identity=28.4615384615385, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 45042; Mature: 44910
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFT CCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH TQLFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRN HHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC GDFDGGTLAGVRQLTSVLQGQPVANVPAAASEVTTSTIATSSGAVAQGIDSSLVEGILLL CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHH LGIILLGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVLSSVQSDPIRLFLYSGSLC HHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCHH LGLFLGLSSGTWLGLALPVVAALATDGTLGRKRGIPFQPVVCQSCGRPMRPIQAQVLDTC HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH LSPGDRLAKSRGRASYYGWFCPSCQGAAVVVRENGFYRHLYCPRCQALTLDLTTQVLREA CCCHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCCEEEHHHHHHHHHHH TYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFGGDSGGDSDFGGGSSGGGGAG HCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSW CCC >Mature Secondary Structure PNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFT CCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH TQLFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRN HHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHCC GDFDGGTLAGVRQLTSVLQGQPVANVPAAASEVTTSTIATSSGAVAQGIDSSLVEGILLL CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHH LGIILLGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVLSSVQSDPIRLFLYSGSLC HHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCHH LGLFLGLSSGTWLGLALPVVAALATDGTLGRKRGIPFQPVVCQSCGRPMRPIQAQVLDTC HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH LSPGDRLAKSRGRASYYGWFCPSCQGAAVVVRENGFYRHLYCPRCQALTLDLTTQVLREA CCCHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEEEECCCCCEEEHHHHHHHHHHH TYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFGGDSGGDSDFGGGSSGGGGAG HCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]