Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is kch [C]

Identifier: 86606261

GI number: 86606261

Start: 1609166

End: 1610215

Strand: Reverse

Name: kch [C]

Synonym: CYA_1599

Alternate gene names: 86606261

Gene position: 1610215-1609166 (Counterclockwise)

Preceding gene: 86606263

Following gene: 86606255

Centisome position: 54.9

GC content: 61.33

Gene sequence:

>1050_bases
ATGGCTTCTGCTCGTCCCCCGTTTCCTCCTGCCAAAAGGGATCCTGGTATCCAGCGGGATCTGAGTTTGGGAGTAGGGGC
GCTGCTGGGCGTTGTCCTGATCGGCACCCTTTGGTACCACGGGGTGGAGCAATGGCCTTGGGTGGAAGCTTTTTACATGA
GCGTTATCACCCTAACTACTGTGGGCTTCATGGAGGTGCAGCCGCTGGGGGATCGGGGGCGCTTGTTCACGGTGGCCTTG
ATCCTGATGGGGGTCTTGAGCATCGGGTTCATGGTGAACCGCTTTACAGAGGCCCTCATCCAGGGGCATTTTCAGGAAGG
GATCCGGCAGCGGAAGTGGAAGAAACAGATGGAAGCGCTGAACAACCACTACATCGTCTGCGGTTTTGGGCGCATTGGGC
GACAGGTGGCCCAGGAGTTTCAGGCAGAGGGGGTGCCCTTTTTGGTGATCGATCAATCGGCCGAGGCAATTCAGGTGGCC
CAAGAGCTGGGATATGTCGCTCTCCAGGGAGACAGCACTCTCGATGCCACCTTGCTGGCGGCGCGGGTGCAGCAGGCCGA
GGGGTTGATTGCCGCCCTCTCCAGCGATGCCGAAAACCTCTATGTGGTGCTGTCGGCCCGCACCCTCAACCCTCGTATCC
GCACCATTGCCCGCGCCAACACGGAAGAGGCTTTGCAAAAGCTGCAGCGAGCGGGCGTTGCCCACGCCATCTCTCCCTTC
ATCACCGGTGGAAAACGGATGGCAGCGGCTGCCCTGCGCCCCCGCGTGGTGGACTTTGTGGATGGGATCCTGTCGGGTCG
AGATCGCACTTTTTACTTGGAAGAGTACGAGCTGGCGGCGCAAGAATGCCCCTATGTTGGCCAGACCCTGGGGAAAGCCA
ATCTAAGGGCGCGATCCGGCGCGTTGGTGGTGGCAATTCGGCGAGCCGATGGCCAGCTGATTGGCGGCCCCAGCGGTGAC
ACCCTGTTGCAACCGGGGGATCTGCTGCTGTGTATGGGCACGGCCGAGCAGTTGCGCCGCCTGGGCCAGTTGCTCTATCC
CCGCCCCTAG

Upstream 100 bases:

>100_bases
GTACTCGGGCATCTGCACTCCACTCGCTGCTGCTCAACAACTGACTTTCTCCTACCCATTGTAGTTCTCGCTTTTTCCCC
GCTCGATCTGGCTGGGCCGT

Downstream 100 bases:

>100_bases
ATGGGCTGGACAAGTCGGCTAGATACGCCTGAGGATGCTGGGGCCGTGGGAGTCGGTGCCGCAGGTTTTCAAAAGTCCGT
AGGTCTCTGCCAGCTTTTCC

Product: VIC family potassium channel protein

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK1 [H]

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MASARPPFPPAKRDPGIQRDLSLGVGALLGVVLIGTLWYHGVEQWPWVEAFYMSVITLTTVGFMEVQPLGDRGRLFTVAL
ILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIVCGFGRIGRQVAQEFQAEGVPFLVIDQSAEAIQVA
QELGYVALQGDSTLDATLLAARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPF
ITGGKRMAAAALRPRVVDFVDGILSGRDRTFYLEEYELAAQECPYVGQTLGKANLRARSGALVVAIRRADGQLIGGPSGD
TLLQPGDLLLCMGTAEQLRRLGQLLYPRP

Sequences:

>Translated_349_residues
MASARPPFPPAKRDPGIQRDLSLGVGALLGVVLIGTLWYHGVEQWPWVEAFYMSVITLTTVGFMEVQPLGDRGRLFTVAL
ILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIVCGFGRIGRQVAQEFQAEGVPFLVIDQSAEAIQVA
QELGYVALQGDSTLDATLLAARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPF
ITGGKRMAAAALRPRVVDFVDGILSGRDRTFYLEEYELAAQECPYVGQTLGKANLRARSGALVVAIRRADGQLIGGPSGD
TLLQPGDLLLCMGTAEQLRRLGQLLYPRP
>Mature_348_residues
ASARPPFPPAKRDPGIQRDLSLGVGALLGVVLIGTLWYHGVEQWPWVEAFYMSVITLTTVGFMEVQPLGDRGRLFTVALI
LMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEALNNHYIVCGFGRIGRQVAQEFQAEGVPFLVIDQSAEAIQVAQ
ELGYVALQGDSTLDATLLAARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPFI
TGGKRMAAAALRPRVVDFVDGILSGRDRTFYLEEYELAAQECPYVGQTLGKANLRARSGALVVAIRRADGQLIGGPSGDT
LLQPGDLLLCMGTAEQLRRLGQLLYPRP

Specific function: Potassium channel protein. Seems to conduct potassium at low membrane potentials [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787503, Length=205, Percent_Identity=26.3414634146341, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR003280
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 38096; Mature: 37965

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASARPPFPPAKRDPGIQRDLSLGVGALLGVVLIGTLWYHGVEQWPWVEAFYMSVITLTT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGFMEVQPLGDRGRLFTVALILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEAL
HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNHYIVCGFGRIGRQVAQEFQAEGVPFLVIDQSAEAIQVAQELGYVALQGDSTLDATLLA
CCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCEEEEECCCCHHHHHHH
ARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPF
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
ITGGKRMAAAALRPRVVDFVDGILSGRDRTFYLEEYELAAQECPYVGQTLGKANLRARSG
HCCCHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHCCCCCCCCCC
ALVVAIRRADGQLIGGPSGDTLLQPGDLLLCMGTAEQLRRLGQLLYPRP
EEEEEEEECCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASARPPFPPAKRDPGIQRDLSLGVGALLGVVLIGTLWYHGVEQWPWVEAFYMSVITLTT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGFMEVQPLGDRGRLFTVALILMGVLSIGFMVNRFTEALIQGHFQEGIRQRKWKKQMEAL
HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNHYIVCGFGRIGRQVAQEFQAEGVPFLVIDQSAEAIQVAQELGYVALQGDSTLDATLLA
CCCEEEEECHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCEEEEECCCCHHHHHHH
ARVQQAEGLIAALSSDAENLYVVLSARTLNPRIRTIARANTEEALQKLQRAGVAHAISPF
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
ITGGKRMAAAALRPRVVDFVDGILSGRDRTFYLEEYELAAQECPYVGQTLGKANLRARSG
HCCCHHHHHHHHCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCHHHHHHCCCCCCCCCC
ALVVAIRRADGQLIGGPSGDTLLQPGDLLLCMGTAEQLRRLGQLLYPRP
EEEEEEEECCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]