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The map label for this gene is ynbA [H]

Identifier: 86606241

GI number: 86606241

Start: 1587092

End: 1588858

Strand: Reverse

Name: ynbA [H]

Synonym: CYA_1577

Alternate gene names: 86606241

Gene position: 1588858-1587092 (Counterclockwise)

Preceding gene: 86606242

Following gene: 86606240

Centisome position: 54.18

GC content: 64.4

Gene sequence:

>1767_bases
ATGCCCAGGGCTAGCACCTCTCGCCATCAGACCAACCCCCGCTTCAGCTCTGCTATCGCTACGCGAGGCTTTCGCGAACA
GGCCAAAGGGTTAAAGCCCCACCAACAAAAGCAACTGCAACGGCTTTACCAACTGCGCCTACCCCCCGACCGCTTGGTGA
CGGTGGAGTTTGCCCAACGGCTGGGATCCCTGACCCAAGAGTTGGAAGGCCGGCCCATCAGCGTTTACCTCAACCGGCGC
GGCCAGGTGATCCGCGTAGGGGTGGGATCCCCTTTTGAAACCCAGATTCCCGCTTGGGAATTGCCCCGCCAGGGGGCCGA
GCGCCTATCCGGGATCCGCTGCATCACCACCCAAATGGGGGAGGGGGGCCCCGGTCAAAAAGCGCTGACGGCCATGGCCC
TGCAGCGTTTGGATGCCCTCATCACCCTTTCCGTGTCCAAGTCAGGAGGGCACCGACGCCGGGGAGGAGCGGCTACGGGC
TTTGTTCACCGGGCCTATCTGGCCCATCTGCTGCCGGAGGGAGAGCGCCGTTGGCAGGTTTCTGAGCCTTTGCCTTTGGG
GATCCTGGCAGAACAGGATCTGCAGGAGCTGGTGGCGGAGCTGGAGGATGGGTTTCGGCGCCAGTTGACCGCCCGCCAGG
TGGATCTGGATCAGGATCGGGCCATCCTGGTGGGGCTGCAGGAGTCCGGGCAGAGCTACGAGGATCTCATGGATGGGTTG
GCGGAGCTGAGCCGCCTGGTGGAGAGTGCCGGCGGACAGGTGCTGCAAGCCCTCTGGCAGAGGCGGGAAGGCCCCAATTC
GGCCACGGTAATCGGATCCGGTAAGGTGCAAGAGCTGGCGCTGCTGGTCCAGGATCTGGGCGCTAACTTGGTGGTGTTCG
ACCGGGAACTTACCCCCAGCCAGGTGCGCACCCTGGAAGAGGCCCTGGGAGTGCGGGTGGTGGATCGCAGCGAGGTGATC
CTGGATATTTTTGCCCAGCGGGCCAGAACCCGGGCCGGGAAATTGCAGGTGGAGCTGGCGCAACTGCAGTATTTGCTGCC
TCGCTTGGCCGGTCGAGGGCGCACCATGTCTCGGCTAGGTGGGGGCATCGGCACCCGTGGCCCGGGGGAAACCCAACTGG
AAATGGAGCGGCGGGCCATCCAGCGGCGCATCGGCAAGCTGCGGCAAGAGGTGGAAGAGCTGCGCCGCCACCGGCAACGG
CTGCGCCAGCGACGGGAGGGATCCCAAATTCCCGTGGTGGCCCTGGTGGGCTACACCAACGCCGGCAAGTCCACCCTTCT
CAACGCCCTCACCCAGGCCCAGGTCTACGTGGCCGACCAACTCTTTGCCACCTTGGATCCCACTACGCGGCGGCTGGAGC
TGCCCGGCCAGCAGGCAGTGCTGTTGACCGACACGGTGGGATTCTTAACCGAGCTGCCTGAGCAATTGGTAGAGGCCTTC
CAGGCCACGCTGGAGGAGGTGACGGAGGCGGATGCCCTGCTGCACGTGGTGGATCTCTCCCACCCCAACTGGGAAGGGCA
CATCGAGGCGGTGGAAACATTGCTGGACGAGATGCCCCTGGCCACCGGCCCGCGACAACTGGTGTTTAACAAAATTGACC
GCCTCGATCCCGAATGGGTCGAGGACGTGCGCCTGCTCTACCCCAAGGCCCTGTTTGTGTCCGCCGCCAACGGCCAAAAC
TTGGATCAACTGCGCCACACCCTGGCCCAGTTTGCCGCAGCTTTTGCTCCCAGACCCTGCGGGGGTCGGCAGTTTGGGGA
TCCCTGA

Upstream 100 bases:

>100_bases
GGGCCAGTGTTTGCCGCCGTTGCTTTTGGATCCCAAGTTCCTGCTGTCAGCTAGCGTGTATGGTAGATGAAAGCTTGTTT
TTGGGTCTTTCCCCGTCCCC

Downstream 100 bases:

>100_bases
AGCATTTCATCAGAAAATCAAAACTTGGCGGCTCCTCAACATTTAGTTACATCACGGTTACGATGAGTGCAGAGGGCAGT
TAGGTAAAGTTGCCATTTGG

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MPRASTSRHQTNPRFSSAIATRGFREQAKGLKPHQQKQLQRLYQLRLPPDRLVTVEFAQRLGSLTQELEGRPISVYLNRR
GQVIRVGVGSPFETQIPAWELPRQGAERLSGIRCITTQMGEGGPGQKALTAMALQRLDALITLSVSKSGGHRRRGGAATG
FVHRAYLAHLLPEGERRWQVSEPLPLGILAEQDLQELVAELEDGFRRQLTARQVDLDQDRAILVGLQESGQSYEDLMDGL
AELSRLVESAGGQVLQALWQRREGPNSATVIGSGKVQELALLVQDLGANLVVFDRELTPSQVRTLEEALGVRVVDRSEVI
LDIFAQRARTRAGKLQVELAQLQYLLPRLAGRGRTMSRLGGGIGTRGPGETQLEMERRAIQRRIGKLRQEVEELRRHRQR
LRQRREGSQIPVVALVGYTNAGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFLTELPEQLVEAF
QATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEMPLATGPRQLVFNKIDRLDPEWVEDVRLLYPKALFVSAANGQN
LDQLRHTLAQFAAAFAPRPCGGRQFGDP

Sequences:

>Translated_588_residues
MPRASTSRHQTNPRFSSAIATRGFREQAKGLKPHQQKQLQRLYQLRLPPDRLVTVEFAQRLGSLTQELEGRPISVYLNRR
GQVIRVGVGSPFETQIPAWELPRQGAERLSGIRCITTQMGEGGPGQKALTAMALQRLDALITLSVSKSGGHRRRGGAATG
FVHRAYLAHLLPEGERRWQVSEPLPLGILAEQDLQELVAELEDGFRRQLTARQVDLDQDRAILVGLQESGQSYEDLMDGL
AELSRLVESAGGQVLQALWQRREGPNSATVIGSGKVQELALLVQDLGANLVVFDRELTPSQVRTLEEALGVRVVDRSEVI
LDIFAQRARTRAGKLQVELAQLQYLLPRLAGRGRTMSRLGGGIGTRGPGETQLEMERRAIQRRIGKLRQEVEELRRHRQR
LRQRREGSQIPVVALVGYTNAGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFLTELPEQLVEAF
QATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEMPLATGPRQLVFNKIDRLDPEWVEDVRLLYPKALFVSAANGQN
LDQLRHTLAQFAAAFAPRPCGGRQFGDP
>Mature_587_residues
PRASTSRHQTNPRFSSAIATRGFREQAKGLKPHQQKQLQRLYQLRLPPDRLVTVEFAQRLGSLTQELEGRPISVYLNRRG
QVIRVGVGSPFETQIPAWELPRQGAERLSGIRCITTQMGEGGPGQKALTAMALQRLDALITLSVSKSGGHRRRGGAATGF
VHRAYLAHLLPEGERRWQVSEPLPLGILAEQDLQELVAELEDGFRRQLTARQVDLDQDRAILVGLQESGQSYEDLMDGLA
ELSRLVESAGGQVLQALWQRREGPNSATVIGSGKVQELALLVQDLGANLVVFDRELTPSQVRTLEEALGVRVVDRSEVIL
DIFAQRARTRAGKLQVELAQLQYLLPRLAGRGRTMSRLGGGIGTRGPGETQLEMERRAIQRRIGKLRQEVEELRRHRQRL
RQRREGSQIPVVALVGYTNAGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFLTELPEQLVEAFQ
ATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEMPLATGPRQLVFNKIDRLDPEWVEDVRLLYPKALFVSAANGQNL
DQLRHTLAQFAAAFAPRPCGGRQFGDP

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133118, Length=233, Percent_Identity=38.1974248927039, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI310133116, Length=225, Percent_Identity=38.6666666666667, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI310124269, Length=209, Percent_Identity=39.7129186602871, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI310124267, Length=209, Percent_Identity=39.7129186602871, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI310124171, Length=209, Percent_Identity=39.7129186602871, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI310124169, Length=209, Percent_Identity=39.7129186602871, Blast_Score=133, Evalue=4e-31,
Organism=Escherichia coli, GI1790615, Length=337, Percent_Identity=46.8842729970326, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1789574, Length=171, Percent_Identity=29.2397660818713, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17561038, Length=225, Percent_Identity=34.2222222222222, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24650079, Length=318, Percent_Identity=36.4779874213836, Blast_Score=138, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 65347; Mature: 65215

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRASTSRHQTNPRFSSAIATRGFREQAKGLKPHQQKQLQRLYQLRLPPDRLVTVEFAQR
CCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHHH
LGSLTQELEGRPISVYLNRRGQVIRVGVGSPFETQIPAWELPRQGAERLSGIRCITTQMG
HHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHCCHHHHHHHCCCEEEEEECC
EGGPGQKALTAMALQRLDALITLSVSKSGGHRRRGGAATGFVHRAYLAHLLPEGERRWQV
CCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEC
SEPLPLGILAEQDLQELVAELEDGFRRQLTARQVDLDQDRAILVGLQESGQSYEDLMDGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHH
AELSRLVESAGGQVLQALWQRREGPNSATVIGSGKVQELALLVQDLGANLVVFDRELTPS
HHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCHH
QVRTLEEALGVRVVDRSEVILDIFAQRARTRAGKLQVELAQLQYLLPRLAGRGRTMSRLG
HHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHC
GGIGTRGPGETQLEMERRAIQRRIGKLRQEVEELRRHRQRLRQRREGSQIPVVALVGYTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
AGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFLTELPEQLVEAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
QATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEMPLATGPRQLVFNKIDRLDPEWV
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH
EDVRLLYPKALFVSAANGQNLDQLRHTLAQFAAAFAPRPCGGRQFGDP
HHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PRASTSRHQTNPRFSSAIATRGFREQAKGLKPHQQKQLQRLYQLRLPPDRLVTVEFAQR
CCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHEEHHHHHHH
LGSLTQELEGRPISVYLNRRGQVIRVGVGSPFETQIPAWELPRQGAERLSGIRCITTQMG
HHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCHHCCHHHHHHHCCCEEEEEECC
EGGPGQKALTAMALQRLDALITLSVSKSGGHRRRGGAATGFVHRAYLAHLLPEGERRWQV
CCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEC
SEPLPLGILAEQDLQELVAELEDGFRRQLTARQVDLDQDRAILVGLQESGQSYEDLMDGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCHHHHHHHH
AELSRLVESAGGQVLQALWQRREGPNSATVIGSGKVQELALLVQDLGANLVVFDRELTPS
HHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCHH
QVRTLEEALGVRVVDRSEVILDIFAQRARTRAGKLQVELAQLQYLLPRLAGRGRTMSRLG
HHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHC
GGIGTRGPGETQLEMERRAIQRRIGKLRQEVEELRRHRQRLRQRREGSQIPVVALVGYTN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
AGKSTLLNALTQAQVYVADQLFATLDPTTRRLELPGQQAVLLTDTVGFLTELPEQLVEAF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
QATLEEVTEADALLHVVDLSHPNWEGHIEAVETLLDEMPLATGPRQLVFNKIDRLDPEWV
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHH
EDVRLLYPKALFVSAANGQNLDQLRHTLAQFAAAFAPRPCGGRQFGDP
HHHHHHCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]