Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606224

Identifier: 86606224

GI number: 86606224

Start: 1569146

End: 1569517

Strand: Reverse

Name: 86606224

Synonym: CYA_1560

Alternate gene names: NA

Gene position: 1569517-1569146 (Counterclockwise)

Preceding gene: 86606225

Following gene: 86606223

Centisome position: 53.52

GC content: 56.99

Gene sequence:

>372_bases
ATGTCTTCTCAGTCTCCTACAGAACCAGCCCCAGAATCGCCGGACCTTGAAACCCTCAAAAGCCAACTGGCCGAAGCTCA
ACAACTTTTGCAGGACTACCAAAACAAAGTCTCTGCCCTGCAAGCTCAGCTACAGCAAGTCACTGCCCACCGCGACGAAT
TGCAGAAGGCGCTGGCCCAGTTACAGGCGGTGGCCGAGGAGCGGGCCAAGACCATTCAGGAACTGCAAAGCCGCCGAGGG
CAAGTCGCACCTTTACCCAAGCCGCAACCCCAGCCTTCGCCTCTGCACGCGCAAAAGAAGATCATGAATCGGCCCATCTT
TGACAACGTGTCGCCCACCGACGAAGATATGCCCCCCTACATGCTGGACTAG

Upstream 100 bases:

>100_bases
TTCGGGAGAAACTTCCCGCACTCGGCGCAAGGCCAGTGCTAAAACCAGTTCAGAGCCCACCCCTGCAGAATCTACTCCCA
CGGGCGAGGAGCCGACAACG

Downstream 100 bases:

>100_bases
GCAGTTGGTACTAGTCTGGATTGCGCCGGAGGAAAGGAGGGTGTAGGGTTAGGGATCCCTGTCTGCTCGGTTGCCGTTCC
GGTCTGCACGCTATGACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSSQSPTEPAPESPDLETLKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVAEERAKTIQELQSRRG
QVAPLPKPQPQPSPLHAQKKIMNRPIFDNVSPTDEDMPPYMLD

Sequences:

>Translated_123_residues
MSSQSPTEPAPESPDLETLKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVAEERAKTIQELQSRRG
QVAPLPKPQPQPSPLHAQKKIMNRPIFDNVSPTDEDMPPYMLD
>Mature_122_residues
SSQSPTEPAPESPDLETLKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQLQAVAEERAKTIQELQSRRGQ
VAPLPKPQPQPSPLHAQKKIMNRPIFDNVSPTDEDMPPYMLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13763; Mature: 13631

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQSPTEPAPESPDLETLKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAVAEERAKTIQELQSRRGQVAPLPKPQPQPSPLHAQKKIMNRPIFDNVSPTDEDMPPY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
MLD
CCC
>Mature Secondary Structure 
SSQSPTEPAPESPDLETLKSQLAEAQQLLQDYQNKVSALQAQLQQVTAHRDELQKALAQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQAVAEERAKTIQELQSRRGQVAPLPKPQPQPSPLHAQKKIMNRPIFDNVSPTDEDMPPY
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
MLD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA