| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yeaZ [C]
Identifier: 86605955
GI number: 86605955
Start: 1287416
End: 1288099
Strand: Reverse
Name: yeaZ [C]
Synonym: CYA_1273
Alternate gene names: 86605955
Gene position: 1288099-1287416 (Counterclockwise)
Preceding gene: 86605957
Following gene: 86605954
Centisome position: 43.92
GC content: 65.06
Gene sequence:
>684_bases ATGTCAGTTCCCCGCTGGATTTTAGGGATCCACACCACCACGCCTGTTCTGGGCTTGGCCGTGTTGCCGTTGGAGGAGAA GCTGGGGGAGAGCCGCAGCCGGAGTTGGTGGCTGGATCGGGAGATGGCGGCGCAGTTGCACCCTTGCCTGAAGGAGTTCT TGGCCGGCCAGGACTGGTCGCAGATGGCGGGGATCGCTGTCGCTCTGGGGCCGGGGAGTTTTACCGGCAGCCGTTTGGGG GTAAGTGTGGCGCGGCTGTTGGGCCAGCAGTTGCGCATTCCGGTGTTCGGCTACTCGACTTTGGCGGTTCTCGCCCGCCA GGTGTGGCAGGAGCAGGGATCCCCGCCTCAGCCGCTGACGGTGGCGGTGCAGATGGACGCCAAGCGAGGGGAGCAGTATG GTGGCGTGTACCGGCTGGGGCCAGAACATTGGGTTGCCGAAGTGGCGGATCAGATCTGGGAAGAAGCGGCTTGGCAGAAG GTTCTGCGGCAGTGGCCCCAGGCTCTGGTCGTCGATGCTGCCGACTGGGTGGATCCGGCGCCTGTGCTGGCGTTGGCGGA ACTGGCCCGCGCCGACTTCCAAGCAGGCTTGCGCCCTTCCTGGCAGACGGTGTTGCCTCTTTACGGACGTCAGCCGCCCA TTGATCTCAGAGAGCTGAATCGGAGTGCCCCGCAGCCGGGGTAA
Upstream 100 bases:
>100_bases ATGATGGCAAACTTCCCTGAGGAAGCGCGAAGATTGACAACCTAACCTTAAATCATCCGTTAAGTTCTGTCAAGTACCTC GCTTGATCCTGAGAGAGGCC
Downstream 100 bases:
>100_bases GATTGGGAAGTCTGAGCAACGGATCCCTGTGCTGACATGATCTCAAGCAACGACTTGCGCCCCGGCGTCTCTGTGGAAAT TGATGGCGCTCCCTACAAGG
Product: glycoprotease family protein
Products: NA
Alternate protein names: Glycoprotease Family Protein; Glycoprotease Family; Molecular Chaperone
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSVPRWILGIHTTTPVLGLAVLPLEEKLGESRSRSWWLDREMAAQLHPCLKEFLAGQDWSQMAGIAVALGPGSFTGSRLG VSVARLLGQQLRIPVFGYSTLAVLARQVWQEQGSPPQPLTVAVQMDAKRGEQYGGVYRLGPEHWVAEVADQIWEEAAWQK VLRQWPQALVVDAADWVDPAPVLALAELARADFQAGLRPSWQTVLPLYGRQPPIDLRELNRSAPQPG
Sequences:
>Translated_227_residues MSVPRWILGIHTTTPVLGLAVLPLEEKLGESRSRSWWLDREMAAQLHPCLKEFLAGQDWSQMAGIAVALGPGSFTGSRLG VSVARLLGQQLRIPVFGYSTLAVLARQVWQEQGSPPQPLTVAVQMDAKRGEQYGGVYRLGPEHWVAEVADQIWEEAAWQK VLRQWPQALVVDAADWVDPAPVLALAELARADFQAGLRPSWQTVLPLYGRQPPIDLRELNRSAPQPG >Mature_226_residues SVPRWILGIHTTTPVLGLAVLPLEEKLGESRSRSWWLDREMAAQLHPCLKEFLAGQDWSQMAGIAVALGPGSFTGSRLGV SVARLLGQQLRIPVFGYSTLAVLARQVWQEQGSPPQPLTVAVQMDAKRGEQYGGVYRLGPEHWVAEVADQIWEEAAWQKV LRQWPQALVVDAADWVDPAPVLALAELARADFQAGLRPSWQTVLPLYGRQPPIDLRELNRSAPQPG
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25095; Mature: 24964
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPRWILGIHTTTPVLGLAVLPLEEKLGESRSRSWWLDREMAAQLHPCLKEFLAGQDWS CCCCCCEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH QMAGIAVALGPGSFTGSRLGVSVARLLGQQLRIPVFGYSTLAVLARQVWQEQGSPPQPLT HHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCEE VAVQMDAKRGEQYGGVYRLGPEHWVAEVADQIWEEAAWQKVLRQWPQALVVDAADWVDPA EEEEECCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHCCCHH PVLALAELARADFQAGLRPSWQTVLPLYGRQPPIDLRELNRSAPQPG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure SVPRWILGIHTTTPVLGLAVLPLEEKLGESRSRSWWLDREMAAQLHPCLKEFLAGQDWS CCCCCEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH QMAGIAVALGPGSFTGSRLGVSVARLLGQQLRIPVFGYSTLAVLARQVWQEQGSPPQPLT HHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCEE VAVQMDAKRGEQYGGVYRLGPEHWVAEVADQIWEEAAWQKVLRQWPQALVVDAADWVDPA EEEEECCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHCCCHH PVLALAELARADFQAGLRPSWQTVLPLYGRQPPIDLRELNRSAPQPG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA