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The map label for this gene is petH

Identifier: 86605940

GI number: 86605940

Start: 1272774

End: 1273664

Strand: Reverse

Name: petH

Synonym: CYA_1257

Alternate gene names: 86605940

Gene position: 1273664-1272774 (Counterclockwise)

Preceding gene: 86605950

Following gene: 86605939

Centisome position: 43.43

GC content: 59.03

Gene sequence:

>891_bases
ATGGTTGCCAGCGCCCAAAAGCGAGAAGTTGTTGTCAATCTGTACCGTCCCAACGCGCCCCTGATCGGCCAGTGTGTAGA
GACCTACTCCCTTGTGGGGGAAGGGGCACCCGGCCTGACCAAGCACATTGTGCTCAGCCTGCCGGATCCCAACTACCGCT
ACCTGGAGGGCCAAAGCGTTGGCATTATTCCTCCTGGCGTAGATGACAAGGGCAAGCCCCACAAGCCCCGCCTCTACTCC
ATTGCCTCTACCCGCTATGGCGACGATGGCGAGGGGCGCACCGTTTCTCTGAGTGTGAAACGGGCCGAATACGTGGATAA
GGAGACAGGCCAGCCGGGGGTAGGGGTCTGCTCCGGCTTCCTCACCGATCTCAAACCCGGCGACGAGGTGATGATCACCG
GGCCCTCGGGGAAAACTTTTTTGCTGCCGGAAGATGAGAACGCCAACCTGATTTTGATTGCCACCGGCACCGGCATCGCC
CCTTTTCGCGCCTTCATCAAGCACCTGTTTGAAGAGGATCCCAACTATCAGGGCAAGATCTGGCTGTTTTTTGGGGTGCC
CACCACGTCCACCTTGCTCTACCACGGGGATCTAGAGGCCTGGAAAGCCCAGTATGGGGATCGCTTCCGCGTCGATTACG
CCATCAGCCGCGAACAGCAAACCCCCGACGGCAAAAAGATGTACGTGCAAAACCGCATGGCCGAGTACGGCCCCGAGCTG
TGGGAGATGCTGCAGCAGCCCAACACCTACACTTACATCTGCGGCCTCAAGGGAATGGAGGACGGCATCAACAGCGTCAT
GGCCCCCCTTGCCGAGCAAGCCGGTCAAGACTGGAGCAAGTTCCAGAAGGAGCTGAAGAAGGCCAACAGGTGGCACGAGG
AAACCTACTGA

Upstream 100 bases:

>100_bases
GGCCTGGGGTGTTCCCCTCCGGCAAGTTCCCTTCGGGCGGGCGGGCTGCTAAGGTGTTTGCTAGAGAGTTTTCTCCCATT
GCCAGGAGCAGATCGCCGTT

Downstream 100 bases:

>100_bases
GGGGATCCCTTTGGGTTAACTGGTTTCCGGTGGATCCCGTCGGTGCCGGGGATCCGCAAAACATGCCAAAATGCTCGTAT
CTTAGCCCACCTGAAGCCGA

Product: ferredoxin--NADP reductase

Products: NA

Alternate protein names: FNR [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MVASAQKREVVVNLYRPNAPLIGQCVETYSLVGEGAPGLTKHIVLSLPDPNYRYLEGQSVGIIPPGVDDKGKPHKPRLYS
IASTRYGDDGEGRTVSLSVKRAEYVDKETGQPGVGVCSGFLTDLKPGDEVMITGPSGKTFLLPEDENANLILIATGTGIA
PFRAFIKHLFEEDPNYQGKIWLFFGVPTTSTLLYHGDLEAWKAQYGDRFRVDYAISREQQTPDGKKMYVQNRMAEYGPEL
WEMLQQPNTYTYICGLKGMEDGINSVMAPLAEQAGQDWSKFQKELKKANRWHEETY

Sequences:

>Translated_296_residues
MVASAQKREVVVNLYRPNAPLIGQCVETYSLVGEGAPGLTKHIVLSLPDPNYRYLEGQSVGIIPPGVDDKGKPHKPRLYS
IASTRYGDDGEGRTVSLSVKRAEYVDKETGQPGVGVCSGFLTDLKPGDEVMITGPSGKTFLLPEDENANLILIATGTGIA
PFRAFIKHLFEEDPNYQGKIWLFFGVPTTSTLLYHGDLEAWKAQYGDRFRVDYAISREQQTPDGKKMYVQNRMAEYGPEL
WEMLQQPNTYTYICGLKGMEDGINSVMAPLAEQAGQDWSKFQKELKKANRWHEETY
>Mature_296_residues
MVASAQKREVVVNLYRPNAPLIGQCVETYSLVGEGAPGLTKHIVLSLPDPNYRYLEGQSVGIIPPGVDDKGKPHKPRLYS
IASTRYGDDGEGRTVSLSVKRAEYVDKETGQPGVGVCSGFLTDLKPGDEVMITGPSGKTFLLPEDENANLILIATGTGIA
PFRAFIKHLFEEDPNYQGKIWLFFGVPTTSTLLYHGDLEAWKAQYGDRFRVDYAISREQQTPDGKKMYVQNRMAEYGPEL
WEMLQQPNTYTYICGLKGMEDGINSVMAPLAEQAGQDWSKFQKELKKANRWHEETY

Specific function: Essential for growth [H]

COG id: COG0369

COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=May be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Homo sapiens, GI24041029, Length=236, Percent_Identity=31.7796610169492, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7657393, Length=236, Percent_Identity=27.5423728813559, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI221316709, Length=236, Percent_Identity=28.3898305084746, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI221316705, Length=241, Percent_Identity=26.9709543568465, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI40254422, Length=229, Percent_Identity=29.2576419213974, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1789123, Length=233, Percent_Identity=33.9055793991416, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17566446, Length=213, Percent_Identity=33.8028169014084, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6321832, Length=171, Percent_Identity=28.6549707602339, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6321143, Length=235, Percent_Identity=29.3617021276596, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI78706872, Length=234, Percent_Identity=33.7606837606838, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583543, Length=234, Percent_Identity=33.7606837606838, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI78706876, Length=234, Percent_Identity=33.7606837606838, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24660907, Length=225, Percent_Identity=29.7777777777778, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24660903, Length=225, Percent_Identity=29.7777777777778, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582192, Length=233, Percent_Identity=26.1802575107296, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17137192, Length=233, Percent_Identity=26.1802575107296, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR012146
- InterPro:   IPR015701
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR008213
- InterPro:   IPR017938 [H]

Pfam domain/function: PF01383 CpcD; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 33049; Mature: 33049

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVASAQKREVVVNLYRPNAPLIGQCVETYSLVGEGAPGLTKHIVLSLPDPNYRYLEGQSV
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCEE
GIIPPGVDDKGKPHKPRLYSIASTRYGDDGEGRTVSLSVKRAEYVDKETGQPGVGVCSGF
EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHH
LTDLKPGDEVMITGPSGKTFLLPEDENANLILIATGTGIAPFRAFIKHLFEEDPNYQGKI
HHCCCCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE
WLFFGVPTTSTLLYHGDLEAWKAQYGDRFRVDYAISREQQTPDGKKMYVQNRMAEYGPEL
EEEEECCCCCEEEEECCHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHH
WEMLQQPNTYTYICGLKGMEDGINSVMAPLAEQAGQDWSKFQKELKKANRWHEETY
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVASAQKREVVVNLYRPNAPLIGQCVETYSLVGEGAPGLTKHIVLSLPDPNYRYLEGQSV
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCEE
GIIPPGVDDKGKPHKPRLYSIASTRYGDDGEGRTVSLSVKRAEYVDKETGQPGVGVCSGF
EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHH
LTDLKPGDEVMITGPSGKTFLLPEDENANLILIATGTGIAPFRAFIKHLFEEDPNYQGKI
HHCCCCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE
WLFFGVPTTSTLLYHGDLEAWKAQYGDRFRVDYAISREQQTPDGKKMYVQNRMAEYGPEL
EEEEECCCCCEEEEECCHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHH
WEMLQQPNTYTYICGLKGMEDGINSVMAPLAEQAGQDWSKFQKELKKANRWHEETY
HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]