| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86605762
Identifier: 86605762
GI number: 86605762
Start: 1083395
End: 1084351
Strand: Reverse
Name: 86605762
Synonym: CYA_1067
Alternate gene names: NA
Gene position: 1084351-1083395 (Counterclockwise)
Preceding gene: 86605763
Following gene: 86605761
Centisome position: 36.97
GC content: 61.02
Gene sequence:
>957_bases ATGTCCTCAGATCTGAGACGTCCCCTTCGAATTGTACGGCCCCCCAGGCCCACCTCAACCAGCGAGCCCAGGGGATCAGC TCAAGATGTCGGGTCAGCTGCTGGTGGGGGCCAGCCTGTTGTCGCCGCCGCCGCTACGCTAGAGCAGAAGAAAGCGATGG GGAGAGAGCGACCTTGCCTGGAGCCCATCCCGCCGCCCGGGGAGAAGATGCAGTACCGGGCGATTGGCCTCATCGAGGGG CGTTACATTCCCTCGCCCAACCACTTCACTCGCGGGATTTTGCGCACCTCGGATGGTTTAGATCTCAATGCGGTACTGCT AGGCCGGGTGATGAGCCTGGTGCGCAAGTACCTGAAGCCGGAACGCAACTATTTGTGGGTGGTCTATCCCCGCACCCGCG ACAAGAGCCAGGATCTGCACGTGCAGTTGATGGGGGTGTGGGCCCCAGAAGAAATGGGGCAAACTCTGCCAGAGGGATCC CGTCCGACGGTGGTGCCGGACTGGTTTTCCATTCGCGGCGAGGTCGTTTTCCAATCGCAGGAAAAAGGGTTCATTATCGT CAAAATCCGTCAATCCGGCAAAAAGAACTCCGCCGGCTCTTCCCCTCAGCGGGCCCAGACGGCCAAGGGCGCCGCATCGC CTGCGGCAACAGCTCCCAAGCCTCAGGCTTTTAAACTGCGCCTGATCGGATCCTTGCCGGGCAAAGGAGTGGGCATCTTC TGGGATCTGCAGGTGCGCCGCCGCGGATCCCTGCTCTACGTGGAGGCAGGAACTCCCATCGGTCCTGTGCTCAAGGCGCC GCCACGCCCGAAGCGTTCCACTCCCCGCCCCAAACTCAAGAAACACTCTCCCCCCTCCACTCGCGGGCAACAGCTAAGCT CAGCTCAACCTTATTCGCCCTCGGATCCTGCCAAAGCACCCAAGCCAGCTAAGCCGATCAAGAAAAAACGTCTGTAG
Upstream 100 bases:
>100_bases TTTTGGCAACGGCAGATGTCTTGCACTGCCTCCCAGCGTCGTCGCCCACCGCTGGGCATTCTGGTAAACATCCTGGATTG ACTGCAGCGGAACCGTTACG
Downstream 100 bases:
>100_bases CCTCCATTCCTGGATACGAAGTTGTCTCTACTGCACTTCTGATATTAACCTCGTTGTAATAAACCTTTCACCGTGGTTGC GACATGGCAGAGTCAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSSDLRRPLRIVRPPRPTSTSEPRGSAQDVGSAAGGGQPVVAAAATLEQKKAMGRERPCLEPIPPPGEKMQYRAIGLIEG RYIPSPNHFTRGILRTSDGLDLNAVLLGRVMSLVRKYLKPERNYLWVVYPRTRDKSQDLHVQLMGVWAPEEMGQTLPEGS RPTVVPDWFSIRGEVVFQSQEKGFIIVKIRQSGKKNSAGSSPQRAQTAKGAASPAATAPKPQAFKLRLIGSLPGKGVGIF WDLQVRRRGSLLYVEAGTPIGPVLKAPPRPKRSTPRPKLKKHSPPSTRGQQLSSAQPYSPSDPAKAPKPAKPIKKKRL
Sequences:
>Translated_318_residues MSSDLRRPLRIVRPPRPTSTSEPRGSAQDVGSAAGGGQPVVAAAATLEQKKAMGRERPCLEPIPPPGEKMQYRAIGLIEG RYIPSPNHFTRGILRTSDGLDLNAVLLGRVMSLVRKYLKPERNYLWVVYPRTRDKSQDLHVQLMGVWAPEEMGQTLPEGS RPTVVPDWFSIRGEVVFQSQEKGFIIVKIRQSGKKNSAGSSPQRAQTAKGAASPAATAPKPQAFKLRLIGSLPGKGVGIF WDLQVRRRGSLLYVEAGTPIGPVLKAPPRPKRSTPRPKLKKHSPPSTRGQQLSSAQPYSPSDPAKAPKPAKPIKKKRL >Mature_317_residues SSDLRRPLRIVRPPRPTSTSEPRGSAQDVGSAAGGGQPVVAAAATLEQKKAMGRERPCLEPIPPPGEKMQYRAIGLIEGR YIPSPNHFTRGILRTSDGLDLNAVLLGRVMSLVRKYLKPERNYLWVVYPRTRDKSQDLHVQLMGVWAPEEMGQTLPEGSR PTVVPDWFSIRGEVVFQSQEKGFIIVKIRQSGKKNSAGSSPQRAQTAKGAASPAATAPKPQAFKLRLIGSLPGKGVGIFW DLQVRRRGSLLYVEAGTPIGPVLKAPPRPKRSTPRPKLKKHSPPSTRGQQLSSAQPYSPSDPAKAPKPAKPIKKKRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34737; Mature: 34606
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDLRRPLRIVRPPRPTSTSEPRGSAQDVGSAAGGGQPVVAAAATLEQKKAMGRERPCL CCCHHHCCHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EPIPPPGEKMQYRAIGLIEGRYIPSPNHFTRGILRTSDGLDLNAVLLGRVMSLVRKYLKP CCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC ERNYLWVVYPRTRDKSQDLHVQLMGVWAPEEMGQTLPEGSRPTVVPDWFSIRGEVVFQSQ CCCEEEEEEECCCCCCCCEEEEEEEEECHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEEC EKGFIIVKIRQSGKKNSAGSSPQRAQTAKGAASPAATAPKPQAFKLRLIGSLPGKGVGIF CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEE WDLQVRRRGSLLYVEAGTPIGPVLKAPPRPKRSTPRPKLKKHSPPSTRGQQLSSAQPYSP EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDPAKAPKPAKPIKKKRL CCCCCCCCCCCCHHHCCC >Mature Secondary Structure SSDLRRPLRIVRPPRPTSTSEPRGSAQDVGSAAGGGQPVVAAAATLEQKKAMGRERPCL CCHHHCCHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EPIPPPGEKMQYRAIGLIEGRYIPSPNHFTRGILRTSDGLDLNAVLLGRVMSLVRKYLKP CCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCC ERNYLWVVYPRTRDKSQDLHVQLMGVWAPEEMGQTLPEGSRPTVVPDWFSIRGEVVFQSQ CCCEEEEEEECCCCCCCCEEEEEEEEECHHHHHHHCCCCCCCCCCCHHHHCCEEEEEEEC EKGFIIVKIRQSGKKNSAGSSPQRAQTAKGAASPAATAPKPQAFKLRLIGSLPGKGVGIF CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEE WDLQVRRRGSLLYVEAGTPIGPVLKAPPRPKRSTPRPKLKKHSPPSTRGQQLSSAQPYSP EEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDPAKAPKPAKPIKKKRL CCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA