| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is thiS
Identifier: 86605752
GI number: 86605752
Start: 1073705
End: 1073902
Strand: Reverse
Name: thiS
Synonym: CYA_1057
Alternate gene names: NA
Gene position: 1073902-1073705 (Counterclockwise)
Preceding gene: 86605753
Following gene: 86605751
Centisome position: 36.62
GC content: 62.63
Gene sequence:
>198_bases ATGCGTGTCTTGATCAACCAAAAGCCTTACGATCTGCCGGAGGGCACCACGTTGGCCGAGGCGATAGCCCAGGTGGGGGC CAGCGGCCCTTTTGCGGTGGCGGTTAACTTGGAGTTTGTGCCACGCGACCGCTACGAGCAAACCCGTTTGCAAGAAGGCG ACCGGGTGGAGATCGTCGTGCCGGTTGCCGGCGGCTAG
Upstream 100 bases:
>100_bases TTTTGGAGTACCTCCACCACGGCAGTTGCCGCTTGGCGCAGCAGCTTGGGATCCCCTTTCAGGTGCAGGCTGCCCCTCTT GCCGGTGAATCCCTATCGCC
Downstream 100 bases:
>100_bases TGCCCGATTGCCTCCCCTCAAATCCCGCATTGTTGCCCCTCAGCGATGTCCACTCTTCTTCCTGTCTCCCCTTCAACTCG GGCCGATGAGGATCCCTTGG
Product: thiamine biosynthesis protein ThiS
Products: NA
Alternate protein names: ThiS Protein; Thiamine Biosynthesis Protein This; Sulfur Carrier Protein ThiS
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MRVLINQKPYDLPEGTTLAEAIAQVGASGPFAVAVNLEFVPRDRYEQTRLQEGDRVEIVVPVAGG
Sequences:
>Translated_65_residues MRVLINQKPYDLPEGTTLAEAIAQVGASGPFAVAVNLEFVPRDRYEQTRLQEGDRVEIVVPVAGG >Mature_65_residues MRVLINQKPYDLPEGTTLAEAIAQVGASGPFAVAVNLEFVPRDRYEQTRLQEGDRVEIVVPVAGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7053; Mature: 7053
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLINQKPYDLPEGTTLAEAIAQVGASGPFAVAVNLEFVPRDRYEQTRLQEGDRVEIVV CEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHCCCCCEEEEEE PVAGG EECCC >Mature Secondary Structure MRVLINQKPYDLPEGTTLAEAIAQVGASGPFAVAVNLEFVPRDRYEQTRLQEGDRVEIVV CEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHCCCCCEEEEEE PVAGG EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA