| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605748
Identifier: 86605748
GI number: 86605748
Start: 1071255
End: 1071986
Strand: Reverse
Name: 86605748
Synonym: CYA_1053
Alternate gene names: NA
Gene position: 1071986-1071255 (Counterclockwise)
Preceding gene: 86605749
Following gene: 86605747
Centisome position: 36.55
GC content: 61.75
Gene sequence:
>732_bases ATGACTCAGTTTGAGCTGCCTCCTTCCCCTTCCGCAAGGCCTGGCCGGCACAGCGTGGTTTGGCTGGTGGCTGCTGCCGG GCTGACGGTCTTGCTCTGGCAGTTTCCCTGGGGCAATTACCTCCTCTACCCCTTTACCCTGTTAGCCACCTGGTTTCACG AGATGGGCCATGGCCTGATGGCGCTGCTGTTGGGGGGAGAGTTTCATCGTCTCGAGATCTATCCCGACGGCTCGGGGCTG GCCATCCACAGTGGCCAGCTATTTTTGGGGCGGGTGGGGCGGGCCTTGGTAGCCGCTGCCGGGCCGATGGGGCCGCCGCT AGCCGGGGCCCTGTTCATCCTCACCTCCCGCCGCCGCGGCACAGCTCGGCTGGGGCTGGTGTTTTTGGGATCCCTGTTGT TGCTCTCGACGCTGCTCTGGGTGCGCTCTCCCTTTGGCCTGTTGTTCCTCCCGGCCATGGGTTTGGGCATCCTGGCAGTA GCTCGCTGGGCTTCTCCTTGGCTGCGGGGCTTTGCCTTGCAGTTTTTGGGGGTGCAAGCCTGTGTGAGCACCTACCACCA ACTCGACTACCTGTTTGTGGAGTCTGCGGTGATTAACGGGCGGCTGGTCCTCTCGGATTCCAGCCAGATTGCCCAAAACC TGTTTTTGCCCTACTGGTTTTGGGGAGGGGTGATGGCGGTGTTCTCTTTGGTCTTGCTGATCACCAGCTTGCAACTGGCC TTTCGCGACTAG
Upstream 100 bases:
>100_bases AGTTGGCCTGGCTATTTTTGCCTGAGGTGGAACTTTCTTCTGCTGGCAATCGTCTAGACCAGCAGGTCATCTTGGGCCTT TTCCCCACCCACCTGCTGGT
Downstream 100 bases:
>100_bases GGGGCAAAACCGCAATTTTGGAAGTGATTCCTGTCACCTAAAAATCCGTCGCCCATCACTGCCCAGCCGCAAAAACCGCC GCTACAGTAGGGGGCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTQFELPPSPSARPGRHSVVWLVAAAGLTVLLWQFPWGNYLLYPFTLLATWFHEMGHGLMALLLGGEFHRLEIYPDGSGL AIHSGQLFLGRVGRALVAAAGPMGPPLAGALFILTSRRRGTARLGLVFLGSLLLLSTLLWVRSPFGLLFLPAMGLGILAV ARWASPWLRGFALQFLGVQACVSTYHQLDYLFVESAVINGRLVLSDSSQIAQNLFLPYWFWGGVMAVFSLVLLITSLQLA FRD
Sequences:
>Translated_243_residues MTQFELPPSPSARPGRHSVVWLVAAAGLTVLLWQFPWGNYLLYPFTLLATWFHEMGHGLMALLLGGEFHRLEIYPDGSGL AIHSGQLFLGRVGRALVAAAGPMGPPLAGALFILTSRRRGTARLGLVFLGSLLLLSTLLWVRSPFGLLFLPAMGLGILAV ARWASPWLRGFALQFLGVQACVSTYHQLDYLFVESAVINGRLVLSDSSQIAQNLFLPYWFWGGVMAVFSLVLLITSLQLA FRD >Mature_242_residues TQFELPPSPSARPGRHSVVWLVAAAGLTVLLWQFPWGNYLLYPFTLLATWFHEMGHGLMALLLGGEFHRLEIYPDGSGLA IHSGQLFLGRVGRALVAAAGPMGPPLAGALFILTSRRRGTARLGLVFLGSLLLLSTLLWVRSPFGLLFLPAMGLGILAVA RWASPWLRGFALQFLGVQACVSTYHQLDYLFVESAVINGRLVLSDSSQIAQNLFLPYWFWGGVMAVFSLVLLITSLQLAF RD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26638; Mature: 26507
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFELPPSPSARPGRHSVVWLVAAAGLTVLLWQFPWGNYLLYPFTLLATWFHEMGHGLM CCCCCCCCCCCCCCCCCHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ALLLGGEFHRLEIYPDGSGLAIHSGQLFLGRVGRALVAAAGPMGPPLAGALFILTSRRRG HHHHCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCCC TARLGLVFLGSLLLLSTLLWVRSPFGLLFLPAMGLGILAVARWASPWLRGFALQFLGVQA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVSTYHQLDYLFVESAVINGRLVLSDSSQIAQNLFLPYWFWGGVMAVFSLVLLITSLQLA HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FRD HCC >Mature Secondary Structure TQFELPPSPSARPGRHSVVWLVAAAGLTVLLWQFPWGNYLLYPFTLLATWFHEMGHGLM CCCCCCCCCCCCCCCCHHHHHHHHHCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ALLLGGEFHRLEIYPDGSGLAIHSGQLFLGRVGRALVAAAGPMGPPLAGALFILTSRRRG HHHHCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCCC TARLGLVFLGSLLLLSTLLWVRSPFGLLFLPAMGLGILAVARWASPWLRGFALQFLGVQA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVSTYHQLDYLFVESAVINGRLVLSDSSQIAQNLFLPYWFWGGVMAVFSLVLLITSLQLA HHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FRD HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA