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The map label for this gene is olpB [H]

Identifier: 86605675

GI number: 86605675

Start: 987514

End: 989007

Strand: Reverse

Name: olpB [H]

Synonym: CYA_0975

Alternate gene names: 86605675

Gene position: 989007-987514 (Counterclockwise)

Preceding gene: 86605676

Following gene: 86605674

Centisome position: 33.72

GC content: 64.12

Gene sequence:

>1494_bases
TTGCTGGTTGCGGATCCCGTTTGGGCGCAACTTTCCGATATCAGCACCTACTGGGGCGCCCAGTACATCGCCGGGCTCAA
TGAGCGGCAGATCATCGGCGGCTTCCCAGACGGCACCTTTCGCCCCAACGAGTCGATTACGCGGGCCCAGTTTGCCGTTA
TCGTCACCAAAGCTTTTGGGCTAGATACCAACGTCCCTGTGCGCCCCTTTGCCGATCCCATTCCCAGTTGGGCAGCTCCC
TCCATCGGCGCGGCGGCAGCAGCGGGGTTGGTTTCCGGCTTTCCCGACGGCACCTTCCGTCCCAACGATGTCCTCACCCG
CGCCCAGGCCATCACCGTTCTGACCCGCGCCGCCACCAACGGCAGGCTCCTCGAGGATCCCGGTCAAATTGAAGCCATTC
TGTCCGGCTTTACCGATGCCAATTTGGTTCCCAATTTTGCCCGCGCCCCCATCGCGACAGCAGTTCAAGAAGGTCTGTTG
GTGCTCTACCCTGATCCCACCCGACTGAATGCCCAGGCGGTGGCCACGCGGGGGGAAGTGGCGGCTCTCACCTACCAAGC
GCTGGCCAAGGTGGGCCGGGTGCCCAGCCTAGACCCGCCTGTGGGAGCTGCCATCCCCGGGCCAGGGATCCGCACCGAGC
TTCTGGCTCAGGTCCCCCCCACGCCTGAGCCCCTGGCCACGCCGGATATCCCCGTGGAGCCGCTGGTGGAAACGCTGCCC
GCCGCCCCAGAGGTGAGAACTTTCTTTGCCCGCGAGGAGCTGGGATCCGTCAAGCCGGGAGATACCTTGACGGTGTATTT
GCTGGGATCGCCAGGGGCGCAGGCGTCTTTCTCCATTCCCGGCATTGCCTACAACCTGCCCCTGCAGGAAACCCGCCCCG
GCCAATACGAGGGCAGCTACACCTTCCGCAGCCAAGACCGGGCCTCGGAAGCGCCAGTATTTGCCCGTCTGGAGCGGAAT
GGGCTGGTGACCCTGGTGCGATTGCCGGACAAAACCATCAGCATCGGTCGGGTGACCGACACCACCTTCCCCACCATCAG
CGACCTGGCGCCGCCCAACGGAGCGGTGACCGACAACCCGCGCCCATCCATCTCCGCTCGCTTTCAAGATGACCAGGGAA
TCGACCTCAATAGCTTTACCCTGCTGGTGAACAACGTGGACGTTACCGCCCAAGCTCAGCTCAGCCGCACCGGCTTCGCC
TACACCCCAGCCGAGCCGCTGCCCACCGATCGACCGACCTTGATTGCCGTCCAAATTGCCGATACCAGCGGCAACACCGC
CATCCAGCAGTGGTCTTTCCAGGTGCAGGCCGCCCAGCCCACACCCACTCCAACGCCCACCCCTACTCCAACACCCACAC
CCACTCCAACACCCACGCCGACTCCCACACCCACGCCCACACCGGAAGCGACTCCGACCGCAACAGCAACGCCTACCCCC
ACCCCAGAGCCTGTAGTGGAGCCTTTGCCTTCTCCATCTCCCAGCCCTTCTTAG

Upstream 100 bases:

>100_bases
AGCCTTTCTAGCAGGTAGCGAGGAGTTGTAGGGGATGCGTGGGTTTTCTCTTTGGCAAAGTTGGAAGGCGGCAGCCGTGA
TAGCGAGCTGGGGCAGTTTG

Downstream 100 bases:

>100_bases
GCAAGAGGGATCCCATGAACAGGCTTTAGTGGTGTTTTAAAGGCCAATGGGTTGCCCCTAGATACTACATCTAGTGGGCA
CGAGCTGGTCAGGATGCTAA

Product: S-layer protein

Products: NA

Alternate protein names: Outer layer protein B; S-layer protein 1 [H]

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MLVADPVWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKAFGLDTNVPVRPFADPIPSWAAP
SIGAAAAAGLVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLLEDPGQIEAILSGFTDANLVPNFARAPIATAVQEGLL
VLYPDPTRLNAQAVATRGEVAALTYQALAKVGRVPSLDPPVGAAIPGPGIRTELLAQVPPTPEPLATPDIPVEPLVETLP
AAPEVRTFFAREELGSVKPGDTLTVYLLGSPGAQASFSIPGIAYNLPLQETRPGQYEGSYTFRSQDRASEAPVFARLERN
GLVTLVRLPDKTISIGRVTDTTFPTISDLAPPNGAVTDNPRPSISARFQDDQGIDLNSFTLLVNNVDVTAQAQLSRTGFA
YTPAEPLPTDRPTLIAVQIADTSGNTAIQQWSFQVQAAQPTPTPTPTPTPTPTPTPTPTPTPTPTPTPEATPTATATPTP
TPEPVVEPLPSPSPSPS

Sequences:

>Translated_497_residues
MLVADPVWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKAFGLDTNVPVRPFADPIPSWAAP
SIGAAAAAGLVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLLEDPGQIEAILSGFTDANLVPNFARAPIATAVQEGLL
VLYPDPTRLNAQAVATRGEVAALTYQALAKVGRVPSLDPPVGAAIPGPGIRTELLAQVPPTPEPLATPDIPVEPLVETLP
AAPEVRTFFAREELGSVKPGDTLTVYLLGSPGAQASFSIPGIAYNLPLQETRPGQYEGSYTFRSQDRASEAPVFARLERN
GLVTLVRLPDKTISIGRVTDTTFPTISDLAPPNGAVTDNPRPSISARFQDDQGIDLNSFTLLVNNVDVTAQAQLSRTGFA
YTPAEPLPTDRPTLIAVQIADTSGNTAIQQWSFQVQAAQPTPTPTPTPTPTPTPTPTPTPTPTPTPTPEATPTATATPTP
TPEPVVEPLPSPSPSPS
>Mature_497_residues
MLVADPVWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKAFGLDTNVPVRPFADPIPSWAAP
SIGAAAAAGLVSGFPDGTFRPNDVLTRAQAITVLTRAATNGRLLEDPGQIEAILSGFTDANLVPNFARAPIATAVQEGLL
VLYPDPTRLNAQAVATRGEVAALTYQALAKVGRVPSLDPPVGAAIPGPGIRTELLAQVPPTPEPLATPDIPVEPLVETLP
AAPEVRTFFAREELGSVKPGDTLTVYLLGSPGAQASFSIPGIAYNLPLQETRPGQYEGSYTFRSQDRASEAPVFARLERN
GLVTLVRLPDKTISIGRVTDTTFPTISDLAPPNGAVTDNPRPSISARFQDDQGIDLNSFTLLVNNVDVTAQAQLSRTGFA
YTPAEPLPTDRPTLIAVQIADTSGNTAIQQWSFQVQAAQPTPTPTPTPTPTPTPTPTPTPTPTPTPTPEATPTATATPTP
TPEPVVEPLPSPSPSPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008965
- InterPro:   IPR002102
- InterPro:   IPR018452
- InterPro:   IPR001119 [H]

Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 52250; Mature: 52250

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVADPVWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKAFG
CEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHEEEEEEEEECC
LDTNVPVRPFADPIPSWAAPSIGAAAAAGLVSGFPDGTFRPNDVLTRAQAITVLTRAATN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GRLLEDPGQIEAILSGFTDANLVPNFARAPIATAVQEGLLVLYPDPTRLNAQAVATRGEV
CCEECCCCHHHHHHHCCCCCCCCCCHHHCHHHHHHHCCEEEEECCCCCCCHHHECCCCCH
AALTYQALAKVGRVPSLDPPVGAAIPGPGIRTELLAQVPPTPEPLATPDIPVEPLVETLP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
AAPEVRTFFAREELGSVKPGDTLTVYLLGSPGAQASFSIPGIAYNLPLQETRPGQYEGSY
CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCCEEEECCHHCCCCCCCCCCE
TFRSQDRASEAPVFARLERNGLVTLVRLPDKTISIGRVTDTTFPTISDLAPPNGAVTDNP
EECCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCC
RPSISARFQDDQGIDLNSFTLLVNNVDVTAQAQLSRTGFAYTPAEPLPTDRPTLIAVQIA
CCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEHHCCCCEECCCCCCCCCCCEEEEEEEE
DTSGNTAIQQWSFQVQAAQPTPTPTPTPTPTPTPTPTPTPTPTPTPTPEATPTATATPTP
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPEPVVEPLPSPSPSPS
CCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLVADPVWAQLSDISTYWGAQYIAGLNERQIIGGFPDGTFRPNESITRAQFAVIVTKAFG
CEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHEEEEEEEEECC
LDTNVPVRPFADPIPSWAAPSIGAAAAAGLVSGFPDGTFRPNDVLTRAQAITVLTRAATN
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GRLLEDPGQIEAILSGFTDANLVPNFARAPIATAVQEGLLVLYPDPTRLNAQAVATRGEV
CCEECCCCHHHHHHHCCCCCCCCCCHHHCHHHHHHHCCEEEEECCCCCCCHHHECCCCCH
AALTYQALAKVGRVPSLDPPVGAAIPGPGIRTELLAQVPPTPEPLATPDIPVEPLVETLP
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCC
AAPEVRTFFAREELGSVKPGDTLTVYLLGSPGAQASFSIPGIAYNLPLQETRPGQYEGSY
CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEECCCEEEECCHHCCCCCCCCCCE
TFRSQDRASEAPVFARLERNGLVTLVRLPDKTISIGRVTDTTFPTISDLAPPNGAVTDNP
EECCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCCCC
RPSISARFQDDQGIDLNSFTLLVNNVDVTAQAQLSRTGFAYTPAEPLPTDRPTLIAVQIA
CCCEEEEECCCCCCCCCEEEEEEECCCEEEEEEHHCCCCEECCCCCCCCCCCEEEEEEEE
DTSGNTAIQQWSFQVQAAQPTPTPTPTPTPTPTPTPTPTPTPTPTPTPEATPTATATPTP
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPEPVVEPLPSPSPSPS
CCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8458832 [H]