| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605601
Identifier: 86605601
GI number: 86605601
Start: 907420
End: 907773
Strand: Reverse
Name: 86605601
Synonym: CYA_0899
Alternate gene names: NA
Gene position: 907773-907420 (Counterclockwise)
Preceding gene: 86605602
Following gene: 86605598
Centisome position: 30.95
GC content: 45.48
Gene sequence:
>354_bases ATGTCCCGTGAATGGCGTTTCTACCTAGATGATATGATTGAATTTGCCAAGCGAGTCCTTGAATACACAGAGGGGTACAC TCAAGAAGACTTTGAACGGGATCGCCGAACCTATGATGCGACCTTGAGAAACATCGAGTTGATTGGTGAGGCAGCCACTC ACATTCCTGCAGAAGTCCGTAACCAGAACGAAAATATTCCTTGGCGACAACTCATTGCCACTCGTAACCGTATCATTCAT GCTTATCTTGCTCTAGACAACGACGTTTTGTGGAGTATCATCCAAAGTGACATGCCCCAACTGCTTGACAATTTACAGAA ACTAAAGCGTAGTCTCTCCGATTCTCCCTGCTAA
Upstream 100 bases:
>100_bases CTCTTCTACTTGGAAGACAAACTTGGATGCCCCCTAGACCTTGTGACCGACAAGGCTCTACGCCCCGAACTTCGTCCATT GATAGAAAAAGAAGCAATCT
Downstream 100 bases:
>100_bases CCCTAACTTCAGGAGCAACGCCGCCGTTTTCATCCAGTTGGAAACCCCCTCTGACGGGATCCACTCTGGCCAGACTACGG CTTGTTACATCGTTATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSREWRFYLDDMIEFAKRVLEYTEGYTQEDFERDRRTYDATLRNIELIGEAATHIPAEVRNQNENIPWRQLIATRNRIIH AYLALDNDVLWSIIQSDMPQLLDNLQKLKRSLSDSPC
Sequences:
>Translated_117_residues MSREWRFYLDDMIEFAKRVLEYTEGYTQEDFERDRRTYDATLRNIELIGEAATHIPAEVRNQNENIPWRQLIATRNRIIH AYLALDNDVLWSIIQSDMPQLLDNLQKLKRSLSDSPC >Mature_116_residues SREWRFYLDDMIEFAKRVLEYTEGYTQEDFERDRRTYDATLRNIELIGEAATHIPAEVRNQNENIPWRQLIATRNRIIHA YLALDNDVLWSIIQSDMPQLLDNLQKLKRSLSDSPC
Specific function: Unknown
COG id: COG2361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0331 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008201 [H]
Pfam domain/function: PF01934 DUF86 [H]
EC number: NA
Molecular weight: Translated: 13974; Mature: 13843
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREWRFYLDDMIEFAKRVLEYTEGYTQEDFERDRRTYDATLRNIELIGEAATHIPAEVR CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH NQNENIPWRQLIATRNRIIHAYLALDNDVLWSIIQSDMPQLLDNLQKLKRSLSDSPC CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SREWRFYLDDMIEFAKRVLEYTEGYTQEDFERDRRTYDATLRNIELIGEAATHIPAEVR CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH NQNENIPWRQLIATRNRIIHAYLALDNDVLWSIIQSDMPQLLDNLQKLKRSLSDSPC CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]