| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605561
Identifier: 86605561
GI number: 86605561
Start: 865147
End: 865431
Strand: Reverse
Name: 86605561
Synonym: CYA_0857
Alternate gene names: NA
Gene position: 865431-865147 (Counterclockwise)
Preceding gene: 86605562
Following gene: 86605560
Centisome position: 29.51
GC content: 63.51
Gene sequence:
>285_bases GTGGCTCTGGCCGAAGCGCAGTTGGAGGTGGGTACCTCCACCACCTTGCCGCCGCAGGCGGCACCGCTGGTGTTGCCTCC CCCGCCGGTGGGAGTTCGACAAATTAGAGAGGATACCGATCCTGAGCAAACCGCCGATATGCCCCTTTCCCTTCTGGCCG AACAGGTGCTGGAGGCGGTGTGCGAAGCGCAAATCGATGCTCAACGGGCCCTGGCCCTCATGCCCGACCTGAGCGAATCC CACATCCGTGCTGCCTGTCCCAAGCGGCTGATCCCCAAAAGCTGA
Upstream 100 bases:
>100_bases GTGCGGGCGCTGAGGGAAGCTTTGTCTGAATCACGGGTGTCGGCGCTTGTTTGACATTGGATGGGAGAGTCCTTTTCCCG GTGGGGTGGCAGGGCGCGGT
Downstream 100 bases:
>100_bases AGGAAAACAAAGGCTGCCCCAGACCTTGGGTTGACAAGTATCCGAAAAACAAGCTAGAGTAAGCGCGCTCCAGAGGAAGG GTGCTCTAACGGCCGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MALAEAQLEVGTSTTLPPQAAPLVLPPPPVGVRQIREDTDPEQTADMPLSLLAEQVLEAVCEAQIDAQRALALMPDLSES HIRAACPKRLIPKS
Sequences:
>Translated_94_residues MALAEAQLEVGTSTTLPPQAAPLVLPPPPVGVRQIREDTDPEQTADMPLSLLAEQVLEAVCEAQIDAQRALALMPDLSES HIRAACPKRLIPKS >Mature_93_residues ALAEAQLEVGTSTTLPPQAAPLVLPPPPVGVRQIREDTDPEQTADMPLSLLAEQVLEAVCEAQIDAQRALALMPDLSESH IRAACPKRLIPKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10032; Mature: 9901
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAEAQLEVGTSTTLPPQAAPLVLPPPPVGVRQIREDTDPEQTADMPLSLLAEQVLEAV CCCCCCHHCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHH CEAQIDAQRALALMPDLSESHIRAACPKRLIPKS HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure ALAEAQLEVGTSTTLPPQAAPLVLPPPPVGVRQIREDTDPEQTADMPLSLLAEQVLEAV CCCCCHHCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHH CEAQIDAQRALALMPDLSESHIRAACPKRLIPKS HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA