| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is ktrB [H]
Identifier: 86605506
GI number: 86605506
Start: 810358
End: 811815
Strand: Reverse
Name: ktrB [H]
Synonym: CYA_0800
Alternate gene names: 86605506
Gene position: 811815-810358 (Counterclockwise)
Preceding gene: 86605507
Following gene: 86605505
Centisome position: 27.68
GC content: 61.45
Gene sequence:
>1458_bases ATGAGAGAGGGCTGCGTCCCGCCGCCGCAACCCGAGGGGGCTGAGGGATGGGTGTCTCCCCGATCTTCAGGAACCCCTCG CCCGACGCTGCCTCAGTCCTCTTGGATCCCGGCCAGTCGCTTACACCGGCTCTTTTTTGGGGACAGGCGTCGCCCGCTGC CGCCGCCCCTGCGCCTGGTCGCGGGGTTGGGCCTGCTGGCGGTGGTGGGGACTTTGCTACTGATGCTGCCGGGAATTGGG CGCGGGGATCCCTTGAGCTGGAATGAGGCGCTGTTTACGGCCATGTCCGCCCTGAGCGTAACGGGTCTCTCGACGATTGT GGCGGCGGAGGATCTCACTTTGTTCGGCCAGATCGTGTTGCTGCTGTTGATCCAAATTGGCGGGGTCGGCTTCATGGTGC TGGCGGTGGTGGTCTTTCAACTGCTCGGGCGGCGCATTTCCCTGCTCAACCGCTTGGCGCTGTGCAACTCGCTGGGCCTG ATCGATCCGGGGGCTATTCTCGAATTGACGCGGCGGGTGTTGATCGGGGTCACCCTGATTGAGCTGGGCGGAGCTTTGCT GCTCTGGGTGCACTGGCGGGATCTCTATGGCCCGGGTCGGGCGGTTTTTCTGGCAATTTTTCACGCCGTCTCTGCTTTTT GCAATGCCGGGTTTGATCTATTTGGGCAAGAGGGGATCCCCACCGATGGACTGTCGCTGGCGATCTTGGCGGCTCTGATT TTTATCGGCGGCTTGGGCATCCCGGTTTTGTCGGATCTGCTAACTTGGCCCCGGGGCCACCGCCCCTCTCTGCACACCCG CATCACCCTGGTCGTGGTGGTGGTCTTGCTCTGCACGGGCGGACTGGGGATGTTCTTGGCCGAGAGCTTGCCCCAGGGAT CCTTGCAGGAGGTAAGCTGGCCCCGCCGCTTGGGCCTGACATTTTTTCAATCGGTTTCGGCCCGTACCGCCGGGTTCGCC GGGATCCCCATTGAGGATTTGACCCCGGCAAGTCAGTTGTTGCTGATGGCTCTCATGTTTATCGGGGCAGCTCCGGCTTC CATGGGGGGTGGCATCACCACCGGCACCTTGGCAGTGTTGGTGTTGGCCTTGTGGGGCTATGCCCGCGGTTTGCCCAGCG CCCAGATTGCGGGGCGCAGTTTGGATCCCTCGATGGTGCGCAAGGCAGCAGCGGTGTTGACCGTCTCTCTGTTCGTGGTG CTATTGGCAACTTGGCTGATCTTAATTACCCACCACCACAGCAGGCTGGATCCGGTGCTCTTCGAGGTCATCTCCGCTTT TGCTACCTGTGGCCTCTCGACGGGGTTCACGGGGGAGCTGAATTTGTTCGGCCAACTGATTATCGTTTTGGTGATGTTCT GGGGCCGGCTGGGGGCGTTAACCATTGTCCTGGCTTTGGCCCAGCAGCAACCGCGTCAGTTGGTGATCTACCCGGAAGAG CCAATTTTAATCGGGTAA
Upstream 100 bases:
>100_bases CTCCCCCGGCAGATTACCTGCTGGAGAAGGGGGATCTGCTGGTGGTGCTGGGGGCCAATACCAACATCTCGCGGCTGAAC GAGATGTAACGGGGGATCCG
Downstream 100 bases:
>100_bases TCTCCTGACCAGAGGACAAGGAAATCCAAAGGGGGAGAGTAGAGGTTGGAGGTGGTTCCCCAGCTCACAGCCCCGCCGGG AAATCTCCAGCTTCCCTCGG
Product: Trk family K(+) transporter
Products: NA
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MREGCVPPPQPEGAEGWVSPRSSGTPRPTLPQSSWIPASRLHRLFFGDRRRPLPPPLRLVAGLGLLAVVGTLLLMLPGIG RGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLFGQIVLLLLIQIGGVGFMVLAVVVFQLLGRRISLLNRLALCNSLGL IDPGAILELTRRVLIGVTLIELGGALLLWVHWRDLYGPGRAVFLAIFHAVSAFCNAGFDLFGQEGIPTDGLSLAILAALI FIGGLGIPVLSDLLTWPRGHRPSLHTRITLVVVVVLLCTGGLGMFLAESLPQGSLQEVSWPRRLGLTFFQSVSARTAGFA GIPIEDLTPASQLLLMALMFIGAAPASMGGGITTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVV LLATWLILITHHHSRLDPVLFEVISAFATCGLSTGFTGELNLFGQLIIVLVMFWGRLGALTIVLALAQQQPRQLVIYPEE PILIG
Sequences:
>Translated_485_residues MREGCVPPPQPEGAEGWVSPRSSGTPRPTLPQSSWIPASRLHRLFFGDRRRPLPPPLRLVAGLGLLAVVGTLLLMLPGIG RGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLFGQIVLLLLIQIGGVGFMVLAVVVFQLLGRRISLLNRLALCNSLGL IDPGAILELTRRVLIGVTLIELGGALLLWVHWRDLYGPGRAVFLAIFHAVSAFCNAGFDLFGQEGIPTDGLSLAILAALI FIGGLGIPVLSDLLTWPRGHRPSLHTRITLVVVVVLLCTGGLGMFLAESLPQGSLQEVSWPRRLGLTFFQSVSARTAGFA GIPIEDLTPASQLLLMALMFIGAAPASMGGGITTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVV LLATWLILITHHHSRLDPVLFEVISAFATCGLSTGFTGELNLFGQLIIVLVMFWGRLGALTIVLALAQQQPRQLVIYPEE PILIG >Mature_485_residues MREGCVPPPQPEGAEGWVSPRSSGTPRPTLPQSSWIPASRLHRLFFGDRRRPLPPPLRLVAGLGLLAVVGTLLLMLPGIG RGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLFGQIVLLLLIQIGGVGFMVLAVVVFQLLGRRISLLNRLALCNSLGL IDPGAILELTRRVLIGVTLIELGGALLLWVHWRDLYGPGRAVFLAIFHAVSAFCNAGFDLFGQEGIPTDGLSLAILAALI FIGGLGIPVLSDLLTWPRGHRPSLHTRITLVVVVVLLCTGGLGMFLAESLPQGSLQEVSWPRRLGLTFFQSVSARTAGFA GIPIEDLTPASQLLLMALMFIGAAPASMGGGITTGTLAVLVLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVV LLATWLILITHHHSRLDPVLFEVISAFATCGLSTGFTGELNLFGQLIIVLVMFWGRLGALTIVLALAQQQPRQLVIYPEE PILIG
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 51604; Mature: 51604
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREGCVPPPQPEGAEGWVSPRSSGTPRPTLPQSSWIPASRLHRLFFGDRRRPLPPPLRLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH AGLGLLAVVGTLLLMLPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLFGQIVL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLIQIGGVGFMVLAVVVFQLLGRRISLLNRLALCNSLGLIDPGAILELTRRVLIGVTLI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ELGGALLLWVHWRDLYGPGRAVFLAIFHAVSAFCNAGFDLFGQEGIPTDGLSLAILAALI HHCCHHEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHH FIGGLGIPVLSDLLTWPRGHRPSLHTRITLVVVVVLLCTGGLGMFLAESLPQGSLQEVSW HHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCC PRRLGLTFFQSVSARTAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGITTGTLAVL HHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH VLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVVLLATWLILITHHHSRLDPVL HHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FEVISAFATCGLSTGFTGELNLFGQLIIVLVMFWGRLGALTIVLALAQQQPRQLVIYPEE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PILIG CCCCC >Mature Secondary Structure MREGCVPPPQPEGAEGWVSPRSSGTPRPTLPQSSWIPASRLHRLFFGDRRRPLPPPLRLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHH AGLGLLAVVGTLLLMLPGIGRGDPLSWNEALFTAMSALSVTGLSTIVAAEDLTLFGQIVL HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLIQIGGVGFMVLAVVVFQLLGRRISLLNRLALCNSLGLIDPGAILELTRRVLIGVTLI HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ELGGALLLWVHWRDLYGPGRAVFLAIFHAVSAFCNAGFDLFGQEGIPTDGLSLAILAALI HHCCHHEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHH FIGGLGIPVLSDLLTWPRGHRPSLHTRITLVVVVVLLCTGGLGMFLAESLPQGSLQEVSW HHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCC PRRLGLTFFQSVSARTAGFAGIPIEDLTPASQLLLMALMFIGAAPASMGGGITTGTLAVL HHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHH VLALWGYARGLPSAQIAGRSLDPSMVRKAAAVLTVSLFVVLLATWLILITHHHSRLDPVL HHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH FEVISAFATCGLSTGFTGELNLFGQLIIVLVMFWGRLGALTIVLALAQQQPRQLVIYPEE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC PILIG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]