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The map label for this gene is yggW [C]

Identifier: 86605492

GI number: 86605492

Start: 793050

End: 794243

Strand: Reverse

Name: yggW [C]

Synonym: CYA_0785

Alternate gene names: 86605492

Gene position: 794243-793050 (Counterclockwise)

Preceding gene: 86605503

Following gene: 86605490

Centisome position: 27.08

GC content: 59.46

Gene sequence:

>1194_bases
ATGGTAGTTGCAGCCTCTGCAGAAGACTTTGCCCTCTCCACTCAGCTTGGCTGGCCGGAGGCGGCCTATCTGCACATTCC
CTTCTGCCGGCAGCGCTGCCACTACTGCGATTTTGCCACCGGCCTGGGCACGCGCGAACTGATCGAAACCTATGTGCAGA
GGCTCTGCCAAGAGATCGGCGGCGCCCACCGCTACCGCCATTTGGCCGGGGATCCCCAGCCCTTGACCAGCATTTTTTTC
GGCGGCGGCACCCCTTCCCTGCTGACGGTGAAGCAGTTGAGTCGGATTTTGAGCCAATTAAGGGAGAGGATCCCGTTTCA
TCCCGACTGCGAGATCTCGCTCGAGGCCAACCCCGGCACCCTGACACGGGAGCAGTTGGCAGGCTACCGGGATCTAGGGG
TTAACCGCATTAGCCTAGGGGTACAGGCCTTTCAAGCGGAGCTGCTGGCCGCCTGCGGTCGCCTCCATGGGGTGGAAGAA
ATTTACGAGGCTGTGGCCGACTTGCAGGCGGTGGGCTTTGAGAATTTCAACCTGGATTTGATCTTCGGGCTGCCCTATCA
AACTTTAGAACATTGGCAGGAGTCACTGCAGGCTGTTCTTGAAATCAACCCCACCCATGTCTCCGTTTACGATCTCACTC
TCGAGCCGGGAACCCGCTTTGGGCGTCTCTACCGGCCGGGGGAGGCGCCTCTGCCCAGCGAGGAGACCACGGTTGCCATG
TACCTGACGGCGCGGGAGTTGCTCACCCAAGCCGGCTACATCCACTACGAGATCTCCAATTTTGCCCGCCCTGGGTATGC
CTGTCGCCACAACCGGGTGTACTGGGAAAACCGCCCCTACTTTGGCTTTGGCATGGGATCGGTCGGCTACGAAGGGGGGC
GGCGCATTCAACAGCCGAAAACTCTCCACGCATACTTTGAACAGGTCAAAGCGCAGGTTCACCCCCTGCCGCCGCCGGCT
TCTGCAGAAGAAATCTGGATGGATACGGTGATGTTGGGGTTGCGCCTCCAGGAAGGGCTGGAGTTGGCAACTCTACAGGA
GCGCTTTGGCAGCAGGAAGGTGGAGCAGGCCTTGCAGAGGCTGGATCCCTATTTTGAAAAAGGTTGGGCCAGTTGTGAGG
CGGGGCGGCTGCGGCTAGTCCCGCCGGAGGGCTGGCTGTTTTCCAACGAAGTCATTGAAGAGCTTTTGTTTTGA

Upstream 100 bases:

>100_bases
TCGGGCAGGGGTCACTGTTGGCGAAGCGTGGCGTAAGCCATGAAGCCTGCACTCTATGCGTCAGCATGAGTGTGGGAGTA
CGTCACCAAGGTAGGGAGCT

Downstream 100 bases:

>100_bases
AGAGAACTGGGCAGGACATCAGTGAAGAAAGCAGCCGCCCGGTTCAAAGTCGACCTTTGTCCAACTTGTCTCTCAGAGGG
TGGGGATAGCAGGGCTTACT

Product: coproporphyrinogen III oxidase

Products: Protoporphyrinogen IX; CO2; H2O

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MVVAASAEDFALSTQLGWPEAAYLHIPFCRQRCHYCDFATGLGTRELIETYVQRLCQEIGGAHRYRHLAGDPQPLTSIFF
GGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGTLTREQLAGYRDLGVNRISLGVQAFQAELLAACGRLHGVEE
IYEAVADLQAVGFENFNLDLIFGLPYQTLEHWQESLQAVLEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAM
YLTARELLTQAGYIHYEISNFARPGYACRHNRVYWENRPYFGFGMGSVGYEGGRRIQQPKTLHAYFEQVKAQVHPLPPPA
SAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQRLDPYFEKGWASCEAGRLRLVPPEGWLFSNEVIEELLF

Sequences:

>Translated_397_residues
MVVAASAEDFALSTQLGWPEAAYLHIPFCRQRCHYCDFATGLGTRELIETYVQRLCQEIGGAHRYRHLAGDPQPLTSIFF
GGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGTLTREQLAGYRDLGVNRISLGVQAFQAELLAACGRLHGVEE
IYEAVADLQAVGFENFNLDLIFGLPYQTLEHWQESLQAVLEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAM
YLTARELLTQAGYIHYEISNFARPGYACRHNRVYWENRPYFGFGMGSVGYEGGRRIQQPKTLHAYFEQVKAQVHPLPPPA
SAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQRLDPYFEKGWASCEAGRLRLVPPEGWLFSNEVIEELLF
>Mature_397_residues
MVVAASAEDFALSTQLGWPEAAYLHIPFCRQRCHYCDFATGLGTRELIETYVQRLCQEIGGAHRYRHLAGDPQPLTSIFF
GGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGTLTREQLAGYRDLGVNRISLGVQAFQAELLAACGRLHGVEE
IYEAVADLQAVGFENFNLDLIFGLPYQTLEHWQESLQAVLEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAM
YLTARELLTQAGYIHYEISNFARPGYACRHNRVYWENRPYFGFGMGSVGYEGGRRIQQPKTLHAYFEQVKAQVHPLPPPA
SAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQRLDPYFEKGWASCEAGRLRLVPPEGWLFSNEVIEELLF

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=312, Percent_Identity=33.974358974359, Blast_Score=160, Evalue=1e-39,
Organism=Escherichia coli, GI1789325, Length=289, Percent_Identity=40.8304498269896, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI87082341, Length=312, Percent_Identity=32.6923076923077, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: 1.3.3.3

Molecular weight: Translated: 44867; Mature: 44867

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVAASAEDFALSTQLGWPEAAYLHIPFCRQRCHYCDFATGLGTRELIETYVQRLCQEIG
CEEECCCCCCEEECCCCCCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHC
GAHRYRHLAGDPQPLTSIFFGGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGT
CHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
LTREQLAGYRDLGVNRISLGVQAFQAELLAACGRLHGVEEIYEAVADLQAVGFENFNLDL
CCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE
IFGLPYQTLEHWQESLQAVLEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAM
EECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
YLTARELLTQAGYIHYEISNFARPGYACRHNRVYWENRPYFGFGMGSVGYEGGRRIQQPK
HHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCH
TLHAYFEQVKAQVHPLPPPASAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
LDPYFEKGWASCEAGRLRLVPPEGWLFSNEVIEELLF
HCHHHHHCCCCCCCCCEEEECCCCCEECHHHHHHHCC
>Mature Secondary Structure
MVVAASAEDFALSTQLGWPEAAYLHIPFCRQRCHYCDFATGLGTRELIETYVQRLCQEIG
CEEECCCCCCEEECCCCCCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHC
GAHRYRHLAGDPQPLTSIFFGGGTPSLLTVKQLSRILSQLRERIPFHPDCEISLEANPGT
CHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
LTREQLAGYRDLGVNRISLGVQAFQAELLAACGRLHGVEEIYEAVADLQAVGFENFNLDL
CCHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE
IFGLPYQTLEHWQESLQAVLEINPTHVSVYDLTLEPGTRFGRLYRPGEAPLPSEETTVAM
EECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
YLTARELLTQAGYIHYEISNFARPGYACRHNRVYWENRPYFGFGMGSVGYEGGRRIQQPK
HHHHHHHHHHCCEEEEEHHHCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCH
TLHAYFEQVKAQVHPLPPPASAEEIWMDTVMLGLRLQEGLELATLQERFGSRKVEQALQR
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH
LDPYFEKGWASCEAGRLRLVPPEGWLFSNEVIEELLF
HCHHHHHCCCCCCCCCEEEECCCCCEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Coproporphyrinogen III; O2; H+

Specific reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]