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The map label for this gene is cse3

Identifier: 86605442

GI number: 86605442

Start: 734975

End: 735607

Strand: Reverse

Name: cse3

Synonym: CYA_0730

Alternate gene names: 86605442

Gene position: 735607-734975 (Counterclockwise)

Preceding gene: 86605443

Following gene: 86605441

Centisome position: 25.08

GC content: 50.39

Gene sequence:

>633_bases
ATGTATCTTTCCCGGCTAATTCTAAACGAGCGACAGCTTCTGGTGCAGCGAGAGCTCAGTAATGCTCACGCTTTGCACCA
GCGAATTATGCATGGTTTTCCCGATCAACCTACCAAAACCCCTCGCTCCGATTGGCATATTCTTTACCGTCAAGAACCTG
ATGGCTGCACCATCCTGGTGCAATCGGTCATTCAGCCGGATTGGTCTCGCTTGCCACAGGGTTATGTCCAAAGGGATCCA
GAAGTCAAAATCTTCGACCTGAGGCCAGAAGTTCTAAGTAAGGGAAGATGCTTTCAGTTCCGACTCCGAGCAAATCCCAG
CAAGCGAGATAAGAAGACCCGCAAGATTGTTGGCTTTTTTCGCTCTGAGGATCAACTGGAATGGCTCCGCCGCCAGGGCT
TTCAGCATGGGTTTGAGGTGTTGGCTGCAGAAGGGATCCCATCGCCGCAAATATTTGGGATCAAAAAGGGGCTCTCCGGG
CCAGTTCGTATCCACACCGTTTTGTTCCAGGGCATATTGCGGGTAACTGATTCTGAAGCTTTTGTTAAAGCAGTACAACA
AGGAATTGGGCGAGGACGCTCCTACGGATGTGGACTTCTATCGCTCAGCAAGATCAGTTACTTTCCACGCTAG

Upstream 100 bases:

>100_bases
AGAGTCTGGATGTGCGCCAAGATGTGCCTTTGAGCTGGCAGCCGCGGCGCTTCGGTTGCCGGGCTGTGGAGACGGAATAC
CATGAACTCCCGGAGGCGAT

Downstream 100 bases:

>100_bases
TTTTGCCTTTTAAGGGGGAGTGTCTTATGATCGCAAAGACAACTACGAAAAGTTTACGATCTATCCCGAAGGTTCGAGAT
AGCATAAGCTTTGTCTATGT

Product: CRISPR-associated Cse3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MYLSRLILNERQLLVQRELSNAHALHQRIMHGFPDQPTKTPRSDWHILYRQEPDGCTILVQSVIQPDWSRLPQGYVQRDP
EVKIFDLRPEVLSKGRCFQFRLRANPSKRDKKTRKIVGFFRSEDQLEWLRRQGFQHGFEVLAAEGIPSPQIFGIKKGLSG
PVRIHTVLFQGILRVTDSEAFVKAVQQGIGRGRSYGCGLLSLSKISYFPR

Sequences:

>Translated_210_residues
MYLSRLILNERQLLVQRELSNAHALHQRIMHGFPDQPTKTPRSDWHILYRQEPDGCTILVQSVIQPDWSRLPQGYVQRDP
EVKIFDLRPEVLSKGRCFQFRLRANPSKRDKKTRKIVGFFRSEDQLEWLRRQGFQHGFEVLAAEGIPSPQIFGIKKGLSG
PVRIHTVLFQGILRVTDSEAFVKAVQQGIGRGRSYGCGLLSLSKISYFPR
>Mature_210_residues
MYLSRLILNERQLLVQRELSNAHALHQRIMHGFPDQPTKTPRSDWHILYRQEPDGCTILVQSVIQPDWSRLPQGYVQRDP
EVKIFDLRPEVLSKGRCFQFRLRANPSKRDKKTRKIVGFFRSEDQLEWLRRQGFQHGFEVLAAEGIPSPQIFGIKKGLSG
PVRIHTVLFQGILRVTDSEAFVKAVQQGIGRGRSYGCGLLSLSKISYFPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789114, Length=218, Percent_Identity=33.0275229357798, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010179 [H]

Pfam domain/function: PF08798 CRISPR_assoc [H]

EC number: NA

Molecular weight: Translated: 24252; Mature: 24252

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSRLILNERQLLVQRELSNAHALHQRIMHGFPDQPTKTPRSDWHILYRQEPDGCTILV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHH
QSVIQPDWSRLPQGYVQRDPEVKIFDLRPEVLSKGRCFQFRLRANPSKRDKKTRKIVGFF
HHHHCCCHHHCCCHHHCCCCCEEEEECCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH
RSEDQLEWLRRQGFQHGFEVLAAEGIPSPQIFGIKKGLSGPVRIHTVLFQGILRVTDSEA
CCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHH
FVKAVQQGIGRGRSYGCGLLSLSKISYFPR
HHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MYLSRLILNERQLLVQRELSNAHALHQRIMHGFPDQPTKTPRSDWHILYRQEPDGCTILV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHH
QSVIQPDWSRLPQGYVQRDPEVKIFDLRPEVLSKGRCFQFRLRANPSKRDKKTRKIVGFF
HHHHCCCHHHCCCHHHCCCCCEEEEECCHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH
RSEDQLEWLRRQGFQHGFEVLAAEGIPSPQIFGIKKGLSGPVRIHTVLFQGILRVTDSEA
CCCHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCHHH
FVKAVQQGIGRGRSYGCGLLSLSKISYFPR
HHHHHHHHHCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]