Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605435

Identifier: 86605435

GI number: 86605435

Start: 728199

End: 728519

Strand: Reverse

Name: 86605435

Synonym: CYA_0723

Alternate gene names: NA

Gene position: 728519-728199 (Counterclockwise)

Preceding gene: 86605436

Following gene: 86605434

Centisome position: 24.84

GC content: 57.32

Gene sequence:

>321_bases
ATGAGCAAAGCCAAGCTGTTGCGAGAGATTCTGGGGCCCCTGCTGGAAGATTACCGCTACTGGTTTGAGCGCTCTCGTCG
CTTTTTGCAAGAAGAAACTTTAGAATTCATCAGCCCAGAGGCGCAGCAGGCCCTCCTGGAGCGGGTTTTGGCTGCCCAAG
CGGAGCTCCAGGCAGCGGAAGCTCTCTATCAGTTGTCGGATAATGAAGTTGGCGTTGACCCGGCCCTGATGGCAAAATGG
CATCGCCTGCTGATGGAGTGCGCCGAGCTGGGCCGTCGCTTTCGCCAAATTCACCCCTCCTCCGACTCATCTGACCCGTG
A

Upstream 100 bases:

>100_bases
ACGGAAGCCCGCCTGGAGGCTACCCAGGGATCCCTGGCGGGGGAAGGTTAAGTTCGGCTAAGATGCTCTCAGCAAACCAG
ACGCGGAGGGATCCCGATCC

Downstream 100 bases:

>100_bases
TGCTGCAGATCCTCTACCTCATCGCTTTTGTGGCCATTGCCTTTGTAGCCCTGCGCAACCTGGTGGCCAACGTGGTTACT
CTGAGCAAAGAAGAGCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSKAKLLREILGPLLEDYRYWFERSRRFLQEETLEFISPEAQQALLERVLAAQAELQAAEALYQLSDNEVGVDPALMAKW
HRLLMECAELGRRFRQIHPSSDSSDP

Sequences:

>Translated_106_residues
MSKAKLLREILGPLLEDYRYWFERSRRFLQEETLEFISPEAQQALLERVLAAQAELQAAEALYQLSDNEVGVDPALMAKW
HRLLMECAELGRRFRQIHPSSDSSDP
>Mature_105_residues
SKAKLLREILGPLLEDYRYWFERSRRFLQEETLEFISPEAQQALLERVLAAQAELQAAEALYQLSDNEVGVDPALMAKWH
RLLMECAELGRRFRQIHPSSDSSDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019728 [H]

Pfam domain/function: PF10792 DUF2605 [H]

EC number: NA

Molecular weight: Translated: 12319; Mature: 12188

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAKLLREILGPLLEDYRYWFERSRRFLQEETLEFISPEAQQALLERVLAAQAELQAAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALYQLSDNEVGVDPALMAKWHRLLMECAELGRRFRQIHPSSDSSDP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKAKLLREILGPLLEDYRYWFERSRRFLQEETLEFISPEAQQALLERVLAAQAELQAAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ALYQLSDNEVGVDPALMAKWHRLLMECAELGRRFRQIHPSSDSSDP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]