| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605433
Identifier: 86605433
GI number: 86605433
Start: 727212
End: 727643
Strand: Reverse
Name: 86605433
Synonym: CYA_0720
Alternate gene names: NA
Gene position: 727643-727212 (Counterclockwise)
Preceding gene: 86605434
Following gene: 86605431
Centisome position: 24.81
GC content: 61.57
Gene sequence:
>432_bases ATGGGATCCGATTCCAGTTCCGATTTCGAGGTGGCAGCCGTCCTGGAGGCGGTGCTGAGCAAGCTGAAGGTTTTGGCGGA GACGGGACAGACCTTTGGCCAGCCGATTACCATTGGCGACACAACGATTGTCCCCTACGTGTCGCTCTACTTTGGCGTTG GGGGAGGAGGGGGCCATTTTGGCAAAACGGCCAGCGGCTTTCGCAGCAACGGACGGGATCCGGCCAGCCTGTTTGGCGGA GCGGGGGGCGGGGTGCGCATCGAGCCGGTGGGCTTTTTGGTGATCCGGGGGGAGCGGGTGGAGCTGCTAACCACGGCCCA AAAGCCCAGCCAGTGGAGCCAGCTTGGCGAGACTATAGTTCCCCTGCTGCAGCAGTGGTTGCAAAGCCGGGCCGACAACT CCTCATCCTCAAATGACCAGCCAAATGACTAG
Upstream 100 bases:
>100_bases AGCAAGGTATCTTAATCTTGTCTGAGACAACTGCAGTCAATCTGGTTCTTCACCCAGTGGCCTCTGGAGCTGGCCTGCAG CGTTTGCGCAAACGTCACCA
Downstream 100 bases:
>100_bases CCGCGAATGAAGAGGCGGGATCCCTGGGGGGAGGGCTGCACGTCGATGCGGTGGGGAAAGGCCTCTTGCAGGCTGGGGAT GTGGGTGATCACCAGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MGSDSSSDFEVAAVLEAVLSKLKVLAETGQTFGQPITIGDTTIVPYVSLYFGVGGGGGHFGKTASGFRSNGRDPASLFGG AGGGVRIEPVGFLVIRGERVELLTTAQKPSQWSQLGETIVPLLQQWLQSRADNSSSSNDQPND
Sequences:
>Translated_143_residues MGSDSSSDFEVAAVLEAVLSKLKVLAETGQTFGQPITIGDTTIVPYVSLYFGVGGGGGHFGKTASGFRSNGRDPASLFGG AGGGVRIEPVGFLVIRGERVELLTTAQKPSQWSQLGETIVPLLQQWLQSRADNSSSSNDQPND >Mature_142_residues GSDSSSDFEVAAVLEAVLSKLKVLAETGQTFGQPITIGDTTIVPYVSLYFGVGGGGGHFGKTASGFRSNGRDPASLFGGA GGGVRIEPVGFLVIRGERVELLTTAQKPSQWSQLGETIVPLLQQWLQSRADNSSSSNDQPND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14945; Mature: 14814
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDSSSDFEVAAVLEAVLSKLKVLAETGQTFGQPITIGDTTIVPYVSLYFGVGGGGGHF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCCCC GKTASGFRSNGRDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTAQKPSQWSQLGETIV CCCCCCHHCCCCCHHHHHCCCCCCEEECCEEEEEECCCEEEEEECCCCCHHHHHHHHHHH PLLQQWLQSRADNSSSSNDQPND HHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GSDSSSDFEVAAVLEAVLSKLKVLAETGQTFGQPITIGDTTIVPYVSLYFGVGGGGGHF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCCCCC GKTASGFRSNGRDPASLFGGAGGGVRIEPVGFLVIRGERVELLTTAQKPSQWSQLGETIV CCCCCCHHCCCCCHHHHHCCCCCCEEECCEEEEEECCCEEEEEECCCCCHHHHHHHHHHH PLLQQWLQSRADNSSSSNDQPND HHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA