| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605426
Identifier: 86605426
GI number: 86605426
Start: 720523
End: 721737
Strand: Reverse
Name: 86605426
Synonym: CYA_0713
Alternate gene names: NA
Gene position: 721737-720523 (Counterclockwise)
Preceding gene: 86605431
Following gene: 86605423
Centisome position: 24.61
GC content: 64.03
Gene sequence:
>1215_bases ATGACCACTCCTCTAACTCAAGCCGAAACCGTTTTTCAGCGTTGCTGGGATCACTGGCAAGCTCTGGCCAGCCGTCAGGA TCTGCAGCCGGAGTTCAAAGCTTTATCCACTCTGCGCAAGCGTCTTGTCACTCGGGTGTTTTCCATTGCGGTGTTTGGTC TGGTCAACCGCGGCAAGTCGGCTGTCTTGAACGCCCTGACCGGCGAGGCCCGCTTGGAGGTAGGGCCCCTCAACGGGGTG ACGCAACAGCCGCAATCGCTGCTGTGGCAGCCGGGGCCGGGGATCCCTTGGCAGGTACGGTTCATCGATACGCCCGGCTT GAACGAGATCAACGGAGAAGCCCGCGAACAGTTGGCCTGGGAGGTGGCCCGCGCCGCCGACTTGATCCTGTTTGTCATCG CCGCAGACCTGACCCAGTTGGAGTACCAGGCTCTGTTGGAGCTGCGCACCCTGCACAAGCCCATCCTGCTGGTGTTGAAC AAGTGCGATCTCTATTCGGAAGCCGAGTTGCAGGCCATTCGCGCCCAGATCAGCCGCCACTTGGGCTGGGTGTTGCCGCA GGAGATCTTGACGGTGGCCGCCCGTCCCAAGCCCACTAAGGTGCGCACCCACTGGCCAGATGGCCGCATCACCTTGGAAT GGGAGCGGCCCGCACCCCAGATCGAGGCCCTGCGAGGGCGCATTGTGGAAATTTTGCAGGCAGAGGCGGGATCCCTCTTG GCCCTCAATGTGCTGAAGCGGCTGGAGCACCTCCAGGCCCAGCTCTGGCAAAAGCAGTGGCAGCACCACGCCCGCTTTGT CGAGCAATGGGGCACGGCCTGCGCCCTCGGCAAGGGGATCGCGGTGGGCTTGGCGCCACTGGGGCTAGATCTGCTGTTGG CGCCGCTACTGGATGGGCTGTGGCTGTTGGGCCTGGGAATGCGGCTGCGCCTGCCCTGGGGATCCTTACGGGAGGCGCTG GGATCCGCCCAGGAGGGGCTGTGGCGACTGCTGCTGCTCAATGGGGCGCTGCTGCTTTTGGCCGAGGGGGTGAGCTCTTG GCTGTGGGGAGGCTGGAGCAACAGCCTCTTGCCGGGTCTGGTGGCGGGGGCGAGTTTGTACCGCTTGGGATCCCTGGCGC CACGGGTGTTGCTCCGGTTTGCCCCAGAGGGGTTCGGCCTAGGGGCCCTCTTGCGGGATCTCATCAGCAGCCAAGAGCTG GCTGAAAAGGCCTAG
Upstream 100 bases:
>100_bases CTTCGGATCCCGGCGGACTTCCCCACGCTGGGGGGGAATACCAGCGTGGCTATGGGGACCAATTCCTTTTAGAGTGGGGG TTAGGCCATTTTTGTTGTCG
Downstream 100 bases:
>100_bases GGTTCCTCTTCCCGGCCATCCTGAGCCATTTCGGCGGCGTGGTAGGAGCTGCGCACCAGGGGCCCAGAGCGCACCTGGCG AAACCCCATCTGGAGGGCAA
Product: GTP-binding domain-containing protein
Products: NA
Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein; Dynamin Family Protein
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGV TQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLN KCDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREAL GSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQEL AEKA
Sequences:
>Translated_404_residues MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGV TQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLN KCDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREAL GSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQEL AEKA >Mature_403_residues TTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGVT QQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNK CDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLLA LNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREALG SAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELA EKA
Specific function: Unknown
COG id: COG1100
COG function: function code R; GTPase SAR1 and related small G proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44785; Mature: 44654
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKS CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AVLNALTGEARLEVGPLNGVTQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAW HHHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH EVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNKCDLYSEAELQAIRAQISRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL HHHHCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH WLLGLGMRLRLPWGSLREALGSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGL HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELAEKA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKS CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AVLNALTGEARLEVGPLNGVTQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAW HHHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH EVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNKCDLYSEAELQAIRAQISRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL HHHHCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH WLLGLGMRLRLPWGSLREALGSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGL HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELAEKA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA