Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605426

Identifier: 86605426

GI number: 86605426

Start: 720523

End: 721737

Strand: Reverse

Name: 86605426

Synonym: CYA_0713

Alternate gene names: NA

Gene position: 721737-720523 (Counterclockwise)

Preceding gene: 86605431

Following gene: 86605423

Centisome position: 24.61

GC content: 64.03

Gene sequence:

>1215_bases
ATGACCACTCCTCTAACTCAAGCCGAAACCGTTTTTCAGCGTTGCTGGGATCACTGGCAAGCTCTGGCCAGCCGTCAGGA
TCTGCAGCCGGAGTTCAAAGCTTTATCCACTCTGCGCAAGCGTCTTGTCACTCGGGTGTTTTCCATTGCGGTGTTTGGTC
TGGTCAACCGCGGCAAGTCGGCTGTCTTGAACGCCCTGACCGGCGAGGCCCGCTTGGAGGTAGGGCCCCTCAACGGGGTG
ACGCAACAGCCGCAATCGCTGCTGTGGCAGCCGGGGCCGGGGATCCCTTGGCAGGTACGGTTCATCGATACGCCCGGCTT
GAACGAGATCAACGGAGAAGCCCGCGAACAGTTGGCCTGGGAGGTGGCCCGCGCCGCCGACTTGATCCTGTTTGTCATCG
CCGCAGACCTGACCCAGTTGGAGTACCAGGCTCTGTTGGAGCTGCGCACCCTGCACAAGCCCATCCTGCTGGTGTTGAAC
AAGTGCGATCTCTATTCGGAAGCCGAGTTGCAGGCCATTCGCGCCCAGATCAGCCGCCACTTGGGCTGGGTGTTGCCGCA
GGAGATCTTGACGGTGGCCGCCCGTCCCAAGCCCACTAAGGTGCGCACCCACTGGCCAGATGGCCGCATCACCTTGGAAT
GGGAGCGGCCCGCACCCCAGATCGAGGCCCTGCGAGGGCGCATTGTGGAAATTTTGCAGGCAGAGGCGGGATCCCTCTTG
GCCCTCAATGTGCTGAAGCGGCTGGAGCACCTCCAGGCCCAGCTCTGGCAAAAGCAGTGGCAGCACCACGCCCGCTTTGT
CGAGCAATGGGGCACGGCCTGCGCCCTCGGCAAGGGGATCGCGGTGGGCTTGGCGCCACTGGGGCTAGATCTGCTGTTGG
CGCCGCTACTGGATGGGCTGTGGCTGTTGGGCCTGGGAATGCGGCTGCGCCTGCCCTGGGGATCCTTACGGGAGGCGCTG
GGATCCGCCCAGGAGGGGCTGTGGCGACTGCTGCTGCTCAATGGGGCGCTGCTGCTTTTGGCCGAGGGGGTGAGCTCTTG
GCTGTGGGGAGGCTGGAGCAACAGCCTCTTGCCGGGTCTGGTGGCGGGGGCGAGTTTGTACCGCTTGGGATCCCTGGCGC
CACGGGTGTTGCTCCGGTTTGCCCCAGAGGGGTTCGGCCTAGGGGCCCTCTTGCGGGATCTCATCAGCAGCCAAGAGCTG
GCTGAAAAGGCCTAG

Upstream 100 bases:

>100_bases
CTTCGGATCCCGGCGGACTTCCCCACGCTGGGGGGGAATACCAGCGTGGCTATGGGGACCAATTCCTTTTAGAGTGGGGG
TTAGGCCATTTTTGTTGTCG

Downstream 100 bases:

>100_bases
GGTTCCTCTTCCCGGCCATCCTGAGCCATTTCGGCGGCGTGGTAGGAGCTGCGCACCAGGGGCCCAGAGCGCACCTGGCG
AAACCCCATCTGGAGGGCAA

Product: GTP-binding domain-containing protein

Products: NA

Alternate protein names: GTPase SAR1 And Related Small G Proteins; Membrane Associated GTPase; GTPase SAR1 And Related Small G Protein; GTPase SAR1-Like Protein; Dynamin Family Protein

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGV
TQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLN
KCDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL
ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREAL
GSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQEL
AEKA

Sequences:

>Translated_404_residues
MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGV
TQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLN
KCDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL
ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREAL
GSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQEL
AEKA
>Mature_403_residues
TTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKSAVLNALTGEARLEVGPLNGVT
QQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAWEVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNK
CDLYSEAELQAIRAQISRHLGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLLA
LNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGLWLLGLGMRLRLPWGSLREALG
SAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGLVAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELA
EKA

Specific function: Unknown

COG id: COG1100

COG function: function code R; GTPase SAR1 and related small G proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44785; Mature: 44654

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKS
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLNALTGEARLEVGPLNGVTQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAW
HHHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
EVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNKCDLYSEAELQAIRAQISRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL
HHHHCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH
ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WLLGLGMRLRLPWGSLREALGSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGL
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELAEKA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTPLTQAETVFQRCWDHWQALASRQDLQPEFKALSTLRKRLVTRVFSIAVFGLVNRGKS
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AVLNALTGEARLEVGPLNGVTQQPQSLLWQPGPGIPWQVRFIDTPGLNEINGEAREQLAW
HHHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
EVARAADLILFVIAADLTQLEYQALLELRTLHKPILLVLNKCDLYSEAELQAIRAQISRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LGWVLPQEILTVAARPKPTKVRTHWPDGRITLEWERPAPQIEALRGRIVEILQAEAGSLL
HHHHCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHH
ALNVLKRLEHLQAQLWQKQWQHHARFVEQWGTACALGKGIAVGLAPLGLDLLLAPLLDGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
WLLGLGMRLRLPWGSLREALGSAQEGLWRLLLLNGALLLLAEGVSSWLWGGWSNSLLPGL
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAGASLYRLGSLAPRVLLRFAPEGFGLGALLRDLISSQELAEKA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA