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The map label for this gene is 86605418

Identifier: 86605418

GI number: 86605418

Start: 713715

End: 714350

Strand: Reverse

Name: 86605418

Synonym: CYA_0706

Alternate gene names: NA

Gene position: 714350-713715 (Counterclockwise)

Preceding gene: 86605420

Following gene: 86605417

Centisome position: 24.36

GC content: 59.91

Gene sequence:

>636_bases
ATGTGGGCCGGTTTTGCGTCAAGTTTGCTGTTGGTTACGGTAGCGGAGTTTGGGGATAAAACCTTTTTTACCCCCCTGAT
TCTGGCTATGCGACACCCGCGCCGCTGGGTTTTCTTGGGGACGTGGCTGGCTTTGGCCGTGATGACCTTGCTGGCAGTGG
TGGCCGGGAAGGTGCTTTTCAAGCTGCTGCCACCCCTGGGCGTGCGAGTGTTGTCGGCTGGGGTTTTCGCGGCTTTTGGG
CTGAGAATGCTCTGGCAAGCTTACAAGATGACTCCCCAGCAGGAAAAAGAAGAAGAGGAAGAAGCCCTCAGGCTGGTGGA
GCAGGCAGAAGAAAAAGGGGCGGGCCGCGGCGGTGCTTGGGCCATTGTGTGGGAAGCCTTTAGCTTGACAGCCTTGGCCG
AGTTCGGGGATAAAACCCAGATTGCCACCGTCTCCTTGGCGGCCACCCACCCGGGATTGAGCGTCTGGGCAGGGGCTACC
CTCGGCCATGGGCTGACGGTGGGGCTGGCGGTGGTGGGAGGTCGTTTTTTAGCAGCTCACATCTCTGAACGCGCCGTGCA
TTGGGTGGGGGGCGGCTTATTTCTGGTGTTTGCGTTGCTGACCGGTTGGGAGCTGCTGGGATCCGGGATCAGCTAG

Upstream 100 bases:

>100_bases
GTTCACGCAGAGGTGAGCTTGGTGAGTCCGTCTGACTTTCCCAGCCTTCACCTCTAGGTGTGAACCGATTCTGCACACAA
GAGAGGTTGGAGGCTAAACG

Downstream 100 bases:

>100_bases
AAATCGCAGGAGCCCCGCACTGTACCCGTAGGGTCAGTGCCGGGAGGAATGCGCTTTGATGAAGTACAATGAACTTATGA
GTCAAGTCCTGACCATATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAVMTLLAVVAGKVLFKLLPPLGVRVLSAGVFAAFG
LRMLWQAYKMTPQQEKEEEEEALRLVEQAEEKGAGRGGAWAIVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLTVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELLGSGIS

Sequences:

>Translated_211_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAVMTLLAVVAGKVLFKLLPPLGVRVLSAGVFAAFG
LRMLWQAYKMTPQQEKEEEEEALRLVEQAEEKGAGRGGAWAIVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLTVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELLGSGIS
>Mature_211_residues
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAVMTLLAVVAGKVLFKLLPPLGVRVLSAGVFAAFG
LRMLWQAYKMTPQQEKEEEEEALRLVEQAEEKGAGRGGAWAIVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGAT
LGHGLTVGLAVVGGRFLAAHISERAVHWVGGGLFLVFALLTGWELLGSGIS

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

Organism=Homo sapiens, GI32189371, Length=218, Percent_Identity=37.6146788990826, Blast_Score=124, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17556152, Length=219, Percent_Identity=39.7260273972603, Blast_Score=130, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17556150, Length=168, Percent_Identity=38.0952380952381, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319664, Length=234, Percent_Identity=27.7777777777778, Blast_Score=92, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281361794, Length=217, Percent_Identity=40.0921658986175, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24647003, Length=217, Percent_Identity=40.0921658986175, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI21357589, Length=217, Percent_Identity=40.0921658986175, Blast_Score=141, Evalue=3e-34,
Organism=Drosophila melanogaster, GI281361792, Length=108, Percent_Identity=39.8148148148148, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI281361790, Length=108, Percent_Identity=39.8148148148148, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI281361796, Length=101, Percent_Identity=42.5742574257426, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 22616; Mature: 22616

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAVMTLLAVVAGKVLF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
KLLPPLGVRVLSAGVFAAFGLRMLWQAYKMTPQQEKEEEEEALRLVEQAEEKGAGRGGAW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
AIVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGATLGHGLTVGLAVVGGRFLAAH
EEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLVFALLTGWELLGSGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWAGFASSLLLVTVAEFGDKTFFTPLILAMRHPRRWVFLGTWLALAVMTLLAVVAGKVLF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
KLLPPLGVRVLSAGVFAAFGLRMLWQAYKMTPQQEKEEEEEALRLVEQAEEKGAGRGGAW
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
AIVWEAFSLTALAEFGDKTQIATVSLAATHPGLSVWAGATLGHGLTVGLAVVGGRFLAAH
EEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHCCHHCCHHHHHHHHHHHHHHHHH
ISERAVHWVGGGLFLVFALLTGWELLGSGIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]