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The map label for this gene is 86605341

Identifier: 86605341

GI number: 86605341

Start: 636800

End: 638650

Strand: Reverse

Name: 86605341

Synonym: CYA_0626

Alternate gene names: NA

Gene position: 638650-636800 (Counterclockwise)

Preceding gene: 86605342

Following gene: 86605339

Centisome position: 21.78

GC content: 60.94

Gene sequence:

>1851_bases
ATGCCAACACCACCTACTTCGATCGCTTCCCGTCCTGCGGCTTCGGCAGCTAAGCCCACTTCCTCTCTGCAGATGATCCC
GCTAGGAGGCGAGCGGGAGATCGGCAAAAACACCTGGGCCTTCCGCTACGAGGATGACATCATCCTGCTGGATGCCGGTT
TGGCTTTTCCCGATGAGAGCATGCACGGCATCAACATCGTGCTGCCGGACATGACCTACATCAAGCAAAACCGGGACAAG
GTGCGGGGGATGGTAGTTACCCACGGCCACGAAGATCACATTGGCGGGATCCCGTATCACCTACGAGAATTCGACATTCC
GGTTATCTATGGCCCGCGTTTGGCGCTGGCGCTGCTGGAGGACAAGCTGCGCGAGGTGGGGCTGTTGAACCGCACAGAAT
TGCGCCCGGTCGGGCCGCGAGATATCGTGCCCCTGAGCAAGAACTTTTTTGCCGAATTCATCCGCAATACCCACTCTTTT
CCCGACAGCTTCACGGTGGCTCTGCACACGCCGGTGGGTGTTGTCATCCAGACGGGCGACTTCAAGATCGACCACACACC
GGTGGATGGGGAGCGCTTCGACCTGCAGCGGCTGGCCGAGCACGGGGAAAAGGGGGTGCTGTGTCTGATTAGCGACTCCA
CCAACGCCGAGGTGCCCGGGTTTACTCCTTCCGAAGCCTCGGTAGTGCCAGGCCTTACCAAGGCGATTGCGGGAGCCAAG
GGACGGGTGATCATCACTACCTTCGCTTCTTCGGTACATCGCCTCAACTTGGTGTTGCAGATTGCTGAGCAGCAGGGCCG
GGTGGTGTCTTTGCTGGGGCGCTCGATGTTGAACGTGGTGGCTCACGCGCGGCGCCTGGGCTACATCCGCTGCAAGGACG
AGACGCTGCAGCCGATGCATGTCATCAACAGCCTGCCGGACGACAAAGTGATCATCCTCACCACGGGATCCCAAGGCGAG
CCGCTGGCTGCTCTGACCCGCATTGCCAACGGCGAGCATCCGCAGTTGCAGATCAAGCCAGGAGACACGGTGATTTGGTC
GGCCAACCCCATTCCCGGCAACACGCTCGCAGTAACGCGGGTCATCGACAAGCTGATGGAGCTGGGAGCCGATGTCATCT
ACGGCAAGGACAAGGGGCTACACGTCTCCGGCCACGGCTGTCAGGAAGACCAAAAGCTGATGATCGCCCTCACGCGCCCC
AAGTTCTTTGTTCCTACCCACGGGGAGTACCGCATGCTCGTCAAGCACGCCGAAACGGCGATGAGCATGGGGATCCCGCG
GGAAAACATCGTGATCATCGGCAACGGCGATGTGGTGGAGGTGAACCAGGAGCGCATTGCCATTGTAGACAAAGTGCCTT
CTGGCCTGCAGATGATCGCCGCTTCCCACGATGGGGTGGTGATGGACGAGATGCTGCAAGAGCGCCAGCAGATGGCCAAA
GATGGCATGCTGACGGTGGTGATCAGCTTGGATGGCAGGGGCCAGTTGCTCTGCACGCCGCAGGTGCAAAGCTTGGGCCT
AGCAGGCGAGGGCACCTCTCTCAAGGGATCCGACCTGAAACCCCTGCTGGAGGACACCCTCAAGCAAGCTTGGCCGCGCT
TTGCCCGCTCGCTGGAGCGGGGCAGGCTGGATATTGACTGGGCCGGCCTCAAGGCAGAAGTGGAGCGGGTGGTGCGCCGC
TTTGTGCGGGAACAGTTGCCCGGCAAGCCGACGGTGCTGGTTTTTGTGCAATCGCCTGAGGAGGAGTCTGTACCTGTAAC
TGCTCTGCCCACAGGGGAGACGAAGACAGAACAGGAACGGATAGCCCTGGGGCGGCGGCGGCGCTCCTCGGCGGCGGTGG
CGGCTTCGTAA

Upstream 100 bases:

>100_bases
CCGCCTTTTACCTATGACCTTGCGGGTAAGTTTGCTGGGATTTGTCTATACCAGTTTTCGTCTGTTGTTTGACTGTCACT
GTTGAGGATCTAAAGCTAGT

Downstream 100 bases:

>100_bases
GACCCGGTGGCTGGCGCTCAGGTCTCCTCCTTCTTCCCTAGGCCGGGGGGGTTGAGCTCTGCTGCCGGAAAGCTGCTGGA
AGAGAGCTCTGCCTTGCCAA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MPTPPTSIASRPAASAAKPTSSLQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGINIVLPDMTYIKQNRDK
VRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEDKLREVGLLNRTELRPVGPRDIVPLSKNFFAEFIRNTHSF
PDSFTVALHTPVGVVIQTGDFKIDHTPVDGERFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAK
GRVIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDKVIILTTGSQGE
PLAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTRVIDKLMELGADVIYGKDKGLHVSGHGCQEDQKLMIALTRP
KFFVPTHGEYRMLVKHAETAMSMGIPRENIVIIGNGDVVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAK
DGMLTVVISLDGRGQLLCTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLERGRLDIDWAGLKAEVERVVRR
FVREQLPGKPTVLVFVQSPEEESVPVTALPTGETKTEQERIALGRRRRSSAAVAAS

Sequences:

>Translated_616_residues
MPTPPTSIASRPAASAAKPTSSLQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGINIVLPDMTYIKQNRDK
VRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEDKLREVGLLNRTELRPVGPRDIVPLSKNFFAEFIRNTHSF
PDSFTVALHTPVGVVIQTGDFKIDHTPVDGERFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAK
GRVIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDKVIILTTGSQGE
PLAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTRVIDKLMELGADVIYGKDKGLHVSGHGCQEDQKLMIALTRP
KFFVPTHGEYRMLVKHAETAMSMGIPRENIVIIGNGDVVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAK
DGMLTVVISLDGRGQLLCTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLERGRLDIDWAGLKAEVERVVRR
FVREQLPGKPTVLVFVQSPEEESVPVTALPTGETKTEQERIALGRRRRSSAAVAAS
>Mature_615_residues
PTPPTSIASRPAASAAKPTSSLQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDESMHGINIVLPDMTYIKQNRDKV
RGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLEDKLREVGLLNRTELRPVGPRDIVPLSKNFFAEFIRNTHSFP
DSFTVALHTPVGVVIQTGDFKIDHTPVDGERFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAKG
RVIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMHVINSLPDDKVIILTTGSQGEP
LAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTRVIDKLMELGADVIYGKDKGLHVSGHGCQEDQKLMIALTRPK
FFVPTHGEYRMLVKHAETAMSMGIPRENIVIIGNGDVVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAKD
GMLTVVISLDGRGQLLCTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLERGRLDIDWAGLKAEVERVVRRF
VREQLPGKPTVLVFVQSPEEESVPVTALPTGETKTEQERIALGRRRRSSAAVAAS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 67393; Mature: 67261

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00136 SUBTILASE_ASP ; PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPPTSIASRPAASAAKPTSSLQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDES
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC
MHGINIVLPDMTYIKQNRDKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLE
CCCEEEEECCHHHHHCCHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHH
DKLREVGLLNRTELRPVGPRDIVPLSKNFFAEFIRNTHSFPDSFTVALHTPVGVVIQTGD
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCC
FKIDHTPVDGERFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAK
EEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GRVIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMH
CCEEEEEHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHH
VINSLPDDKVIILTTGSQGEPLAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTR
HHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCHHHHH
VIDKLMELGADVIYGKDKGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETA
HHHHHHHCCCEEEEECCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHH
MSMGIPRENIVIIGNGDVVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAK
HHHCCCCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHC
DGMLTVVISLDGRGQLLCTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLER
CCEEEEEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRLDIDWAGLKAEVERVVRRFVREQLPGKPTVLVFVQSPEEESVPVTALPTGETKTEQER
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHH
IALGRRRRSSAAVAAS
HHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PTPPTSIASRPAASAAKPTSSLQMIPLGGEREIGKNTWAFRYEDDIILLDAGLAFPDES
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC
MHGINIVLPDMTYIKQNRDKVRGMVVTHGHEDHIGGIPYHLREFDIPVIYGPRLALALLE
CCCEEEEECCHHHHHCCHHHHCEEEEECCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHH
DKLREVGLLNRTELRPVGPRDIVPLSKNFFAEFIRNTHSFPDSFTVALHTPVGVVIQTGD
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCC
FKIDHTPVDGERFDLQRLAEHGEKGVLCLISDSTNAEVPGFTPSEASVVPGLTKAIAGAK
EEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCC
GRVIITTFASSVHRLNLVLQIAEQQGRVVSLLGRSMLNVVAHARRLGYIRCKDETLQPMH
CCEEEEEHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHH
VINSLPDDKVIILTTGSQGEPLAALTRIANGEHPQLQIKPGDTVIWSANPIPGNTLAVTR
HHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCCCHHHHH
VIDKLMELGADVIYGKDKGLHVSGHGCQEDQKLMIALTRPKFFVPTHGEYRMLVKHAETA
HHHHHHHCCCEEEEECCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHH
MSMGIPRENIVIIGNGDVVEVNQERIAIVDKVPSGLQMIAASHDGVVMDEMLQERQQMAK
HHHCCCCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHC
DGMLTVVISLDGRGQLLCTPQVQSLGLAGEGTSLKGSDLKPLLEDTLKQAWPRFARSLER
CCEEEEEEEECCCCCEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRLDIDWAGLKAEVERVVRRFVREQLPGKPTVLVFVQSPEEESVPVTALPTGETKTEQER
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHH
IALGRRRRSSAAVAAS
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]