Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605299

Identifier: 86605299

GI number: 86605299

Start: 594944

End: 595468

Strand: Reverse

Name: 86605299

Synonym: CYA_0583

Alternate gene names: NA

Gene position: 595468-594944 (Counterclockwise)

Preceding gene: 86605300

Following gene: 86605298

Centisome position: 20.3

GC content: 50.48

Gene sequence:

>525_bases
ATGTTTCGCCATCCCGTCACGCGGGTTTCCATCTTTATCGATGGGAACAATATGTTTTATGCTCAACAAAAAAATGGCTG
GTTTTTCGACCCGCGCCGAGTCTTGGATTATTTTGTCAGGTCACAGCCCAACGTCGAGCTAGTCAACGCATTTTGGTACA
CCGGCATCAAGGATCCCAACGATCAAAGGGCCTTTCGAGATGCTCTGATCAGCTTGGGTTTTACGGTGCGCACCAAGATC
CTTAAAGAGTATCGAGACGAAGACTCTGGCCGCTACTCCCAGAAGGCCAACCTGGATATCGAGATCGTCATCGATATGTT
CAACACGGTTGGGCAATACGACAGGATCATCTTGTTTAGCGGCGATGGCGATTTTGAGCGGGCCGTTGAGCTGTTGCGCT
CCAAAAACACTTTGATTACAGTCGTCTCCACTGAAGGAATGATCGCCCGCGAGCTGCGCAATGCCACCGATCGCTACATC
GACCTCAACGACATTCGCCCCTACATCGAGAAGCTGGATAAGTAG

Upstream 100 bases:

>100_bases
GCGCTGGCCTGCCGTGGCCACCCTTACCTTAGGATAATCGACACTCTCGTTTTCACCCTCTTTTCCTGACCAGTCCACCT
TTATTCCGAGAAAAATCTTT

Downstream 100 bases:

>100_bases
GGCTGATCCCTCTACTCTCGAGCTGGCCCCACAGCTCCCCGGCGGAGTTGTCACAACCCACCTGAGGTCCTTCGGGTTTC
TCCGCCTTGAGAGAAAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPNDQRAFRDALISLGFTVRTKI
LKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYI
DLNDIRPYIEKLDK

Sequences:

>Translated_174_residues
MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPNDQRAFRDALISLGFTVRTKI
LKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYI
DLNDIRPYIEKLDK
>Mature_174_residues
MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPNDQRAFRDALISLGFTVRTKI
LKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYI
DLNDIRPYIEKLDK

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20480; Mature: 20480

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN
CCCCCCEEEEEEEECCEEEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
DQRAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFS
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEEHHHCCCCCCEEEEEC
GDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYIDLNDIRPYIEKLDK
CCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN
CCCCCCEEEEEEEECCEEEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEEECCCCCCC
DQRAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFS
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEEHHHCCCCCCEEEEEC
GDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYIDLNDIRPYIEKLDK
CCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA