| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605271
Identifier: 86605271
GI number: 86605271
Start: 569380
End: 569727
Strand: Reverse
Name: 86605271
Synonym: CYA_0555
Alternate gene names: NA
Gene position: 569727-569380 (Counterclockwise)
Preceding gene: 86605273
Following gene: 86605270
Centisome position: 19.43
GC content: 62.93
Gene sequence:
>348_bases ATGTTGCCGAGCAAGCTCATCTTTTCTGGTCTGGCAGCTCTGCTCAGTTTGGGATCCGCTCCAGCCGCTCTGGCCCAGAC ACTCCTCCCGCAGCAAACAGTGCTCCTCGACAGCAGACAGAACAGCGCCACCCCTCTACAAGGCAATGTCCTACAAAACA TCGTCTTCGTTGTGCCCAGCGCCCCAACGCGGCACTTCGCCGGCAGGTGGGGTTGGCACAGCAGCCCCTCACCGCCCCCC GCCCCCATGACAATTCTTATCCTCAACTCCCAAGCCAACCTGTCCGCCGAGGCAGCCAAGCCCCAGGCCTGTGGCCAGCG CTGCCAGGGATCCCTGCGCCTGCCGTAA
Upstream 100 bases:
>100_bases TTTGCTCTAGAGCGTAGCTTTTTTTGCGGCAAGTCGATAGAGCTTTTTGGATGGAACTAGCTAAGGTGCCGGCGTCCCAG CATTTTGGAGAGGAAGGCTG
Downstream 100 bases:
>100_bases AGAAGAGGCTGCTGCTTGTACTTCAGCTAGAAGCCGCAGGAGCCCCGCACTGGACTCCCCACCCCCCACACCCCCCGTGT ACGGGGGGCGAAGGGGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MLPSKLIFSGLAALLSLGSAPAALAQTLLPQQTVLLDSRQNSATPLQGNVLQNIVFVVPSAPTRHFAGRWGWHSSPSPPP APMTILILNSQANLSAEAAKPQACGQRCQGSLRLP
Sequences:
>Translated_115_residues MLPSKLIFSGLAALLSLGSAPAALAQTLLPQQTVLLDSRQNSATPLQGNVLQNIVFVVPSAPTRHFAGRWGWHSSPSPPP APMTILILNSQANLSAEAAKPQACGQRCQGSLRLP >Mature_115_residues MLPSKLIFSGLAALLSLGSAPAALAQTLLPQQTVLLDSRQNSATPLQGNVLQNIVFVVPSAPTRHFAGRWGWHSSPSPPP APMTILILNSQANLSAEAAKPQACGQRCQGSLRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12059; Mature: 12059
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSKLIFSGLAALLSLGSAPAALAQTLLPQQTVLLDSRQNSATPLQGNVLQNIVFVVPS CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEEECCCCCCCCCCCHHHHHEEEECCC APTRHFAGRWGWHSSPSPPPAPMTILILNSQANLSAEAAKPQACGQRCQGSLRLP CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MLPSKLIFSGLAALLSLGSAPAALAQTLLPQQTVLLDSRQNSATPLQGNVLQNIVFVVPS CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEEEECCCCCCCCCCCHHHHHEEEECCC APTRHFAGRWGWHSSPSPPPAPMTILILNSQANLSAEAAKPQACGQRCQGSLRLP CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA