| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is cysT
Identifier: 86605187
GI number: 86605187
Start: 483071
End: 483883
Strand: Reverse
Name: cysT
Synonym: CYA_0469
Alternate gene names: 86605187
Gene position: 483883-483071 (Counterclockwise)
Preceding gene: 86605188
Following gene: 86605186
Centisome position: 16.5
GC content: 59.66
Gene sequence:
>813_bases TTGCTGCAGGCGGTGTTTCCAGTGTCTTGGCCCTGGTGGCTGACCCTGGGCTATCTCTTCCTGATGTTGGTCTTGCCACT AGCTGCCTTGGTTGCCAAGGCCAGCACCTTGGGCTGGGCAGAGTTTTGGCGGATTGCCACCGATCCCCTGGCCCTCTCTG CCTATGAGGTTACTTTTGTAACCGCCTTGCTGGCGGCCTTAGTGAACGGTGTGATGGGCACTCTGACCGCCTGGGTGTTG GTGCGCTACGCCTTCCCTGGGAAAAAGCTCCTCGAGGGGTTGATTGATCTGCCCTTTGCCCTGCCCACGGCTGTGGCCGG CCTCACCCTGGCGACCGTCTACAGCAGCAACGGCTGGATAGGATCCCTGCTGGCTCCCTTGGGAATCCGCATTGCCTTTA CCCGCTGGGGGGTGGGGGTAGCAATGCTGTTTATCTCTTTTCCCTTTGTGGTGCGGACCGTGCAGCCGGTGCTGCAGGAA CTGGAACCGGATGTGGAGGAAGCTGCCTGGAGCTTGGGCGCCTCCCGCTGGCAGACCTTTTGCCGAGTGGTACTGCCGCA AATTCTGCCGTCTATCCTAACGGGGGTGGCGCTGGGGTTTTCTCGCGCTGTCGGTGAGTATGGCTCCATCGTCATTATTG CCGCCAGCATCCCCTTCGAGGATTTGATTGCGGCGGTGCTGGTCATCCAAAGACTGGAACAGTACGACTACGCCGGCGCC ACGGTGATTGGGACGGTGATGCTGGTGATCTCCTTCCTTTTGCTGGCGGTGATTAACCTTCTGCAAGGCTGGGCAAGTCG CCATGAGACCTAA
Upstream 100 bases:
>100_bases GCACATAGGGCAGCAGGTTTACGTGCGCCCCAGGGTAATCAAAGCCTTCCCCATCAAGAAAACGGAAATGACAGCCATGG CGGTGGGAGCTTAGGGAACC
Downstream 100 bases:
>100_bases GGGAGTTGCCGAGGTTCAAGGGAAGCCACCCGCCAACCCTTGGCTGGCTGGCCTGCTGATTGGGATCGTCTTGCTCTATG TGGGGCTGCTCATCGGGATC
Product: sulfate ABC transporter, permease protein CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLQAVFPVSWPWWLTLGYLFLMLVLPLAALVAKASTLGWAEFWRIATDPLALSAYEVTFVTALLAALVNGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRIAFTRWGVGVAMLFISFPFVVRTVQPVLQE LEPDVEEAAWSLGASRWQTFCRVVLPQILPSILTGVALGFSRAVGEYGSIVIIAASIPFEDLIAAVLVIQRLEQYDYAGA TVIGTVMLVISFLLLAVINLLQGWASRHET
Sequences:
>Translated_270_residues MLQAVFPVSWPWWLTLGYLFLMLVLPLAALVAKASTLGWAEFWRIATDPLALSAYEVTFVTALLAALVNGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRIAFTRWGVGVAMLFISFPFVVRTVQPVLQE LEPDVEEAAWSLGASRWQTFCRVVLPQILPSILTGVALGFSRAVGEYGSIVIIAASIPFEDLIAAVLVIQRLEQYDYAGA TVIGTVMLVISFLLLAVINLLQGWASRHET >Mature_270_residues MLQAVFPVSWPWWLTLGYLFLMLVLPLAALVAKASTLGWAEFWRIATDPLALSAYEVTFVTALLAALVNGVMGTLTAWVL VRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWIGSLLAPLGIRIAFTRWGVGVAMLFISFPFVVRTVQPVLQE LEPDVEEAAWSLGASRWQTFCRVVLPQILPSILTGVALGFSRAVGEYGSIVIIAASIPFEDLIAAVLVIQRLEQYDYAGA TVIGTVMLVISFLLLAVINLLQGWASRHET
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=238, Percent_Identity=49.5798319327731, Blast_Score=244, Evalue=6e-66, Organism=Escherichia coli, GI87082099, Length=261, Percent_Identity=36.0153256704981, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1786980, Length=177, Percent_Identity=37.8531073446328, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787369, Length=215, Percent_Identity=31.1627906976744, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29294; Mature: 29294
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQAVFPVSWPWWLTLGYLFLMLVLPLAALVAKASTLGWAEFWRIATDPLALSAYEVTFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TALLAALVNGVMGTLTAWVLVRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH GSLLAPLGIRIAFTRWGVGVAMLFISFPFVVRTVQPVLQELEPDVEEAAWSLGASRWQTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CRVVLPQILPSILTGVALGFSRAVGEYGSIVIIAASIPFEDLIAAVLVIQRLEQYDYAGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCH TVIGTVMLVISFLLLAVINLLQGWASRHET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLQAVFPVSWPWWLTLGYLFLMLVLPLAALVAKASTLGWAEFWRIATDPLALSAYEVTFV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TALLAALVNGVMGTLTAWVLVRYAFPGKKLLEGLIDLPFALPTAVAGLTLATVYSSNGWI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH GSLLAPLGIRIAFTRWGVGVAMLFISFPFVVRTVQPVLQELEPDVEEAAWSLGASRWQTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CRVVLPQILPSILTGVALGFSRAVGEYGSIVIIAASIPFEDLIAAVLVIQRLEQYDYAGA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCH TVIGTVMLVISFLLLAVINLLQGWASRHET HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]