Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

Click here to switch to the map view.

The map label for this gene is 86605041

Identifier: 86605041

GI number: 86605041

Start: 333689

End: 333895

Strand: Reverse

Name: 86605041

Synonym: CYA_0320

Alternate gene names: NA

Gene position: 333895-333689 (Counterclockwise)

Preceding gene: 86605042

Following gene: 86605040

Centisome position: 11.38

GC content: 57.0

Gene sequence:

>207_bases
ATGCGGACTAACGTTGTCTTGGATGACGAGCTGATCGAGTTGATCGAGCGGGCTCGCCAGCTAACCGGCCTCAAGACCAA
GCGCGAGATAATTCACGAAGCGCTGCGCACCCTCATTCGGCTCTACGAGCAAGCCGAGATCCGCAACTTACGCGGCAAGT
TGAAATGGGAGGGAGATCTGCACGAGCAACGCCTCTCCTCTCCCTAA

Upstream 100 bases:

>100_bases
ATACGTCAATACGGCGAATACCGCACCCGGCGGCTGGTGCTAGAAGCGTGGGAGAAGCTGGCGCAACACTAGTCATTATG
CGTAAACAGGGGAGCTTCCC

Downstream 100 bases:

>100_bases
GATCTCCCAGCCCAAGCCTCAGGGCGATCCTCTTGCAGTCGCTAGAACACCTGCTAGGCTTAACCTAGCCAAAATGGCTT
TGGAGAGCCCCGATGGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNLRGKLKWEGDLHEQRLSSP

Sequences:

>Translated_68_residues
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNLRGKLKWEGDLHEQRLSSP
>Mature_68_residues
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNLRGKLKWEGDLHEQRLSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8107; Mature: 8107

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNLRGKLKWEGDL
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HEQRLSSP
HHHCCCCC
>Mature Secondary Structure
MRTNVVLDDELIELIERARQLTGLKTKREIIHEALRTLIRLYEQAEIRNLRGKLKWEGDL
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
HEQRLSSP
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA