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The map label for this gene is psaJ

Identifier: 86605015

GI number: 86605015

Start: 299934

End: 300053

Strand: Reverse

Name: psaJ

Synonym: CYA_0294

Alternate gene names: 86605015

Gene position: 300053-299934 (Counterclockwise)

Preceding gene: 86605016

Following gene: 86605014

Centisome position: 10.23

GC content: 46.67

Gene sequence:

>120_bases
ATGTCTGATTTCACCAAGTTTCTCACCACGGCTCCAGTGGCCTTTATCTTGTTTTCCAGCTTCGTTTTTGCGCTGTTCAT
CGAGATCAACCGCTTCTTCCCCGACATTTTGACGTTCTGA

Upstream 100 bases:

>100_bases
TTCAGGAGCCGGAAGAGGCCGTGCCCATCTCTCCTCGCTGAAGAAGGGGCTTCTCCTCGGCTTTTGGCTTAGCTTCACCC
ATCCAACTTGAGAGGTATGT

Downstream 100 bases:

>100_bases
ACTCGCAAGCCAGGGATCCCCAGCCGCGCCAGCAACACCCACAGGGATCCCTGGTCTTTTGAGCCAGACTTTTTGGAATT
TGAGGTTTTTCTAACCCTTT

Product: photosystem I reaction center subunit IX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MSDFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF

Sequences:

>Translated_39_residues
MSDFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
>Mature_38_residues
SDFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF

Specific function: May help in the organization of the psaE and psaF subunits

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAJ_SYNJA (Q2JXH1)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_473778.1
- ProteinModelPortal:   Q2JXH1
- SMR:   Q2JXH1
- STRING:   Q2JXH1
- GeneID:   3898078
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0294
- TIGR:   CYA_0294
- HOGENOM:   HBG440999
- ProtClustDB:   CLSK750106
- BioCyc:   SSP321327:CYA_0294-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00522
- InterPro:   IPR002615
- ProDom:   PD004198

Pfam domain/function: PF01701 PSI_PsaJ; SSF81544 PSI_PsaJ

EC number: NA

Molecular weight: Translated: 4555; Mature: 4424

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1275d134)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
SDFTKFLTTAPVAFILFSSFVFALFIEINRFFPDILTF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA