Click here to switch to the map view.

The map label for this gene is 86604979

Identifier: 86604979

GI number: 86604979

Start: 264137

End: 265249

Strand: Reverse

Name: 86604979

Synonym: CYA_0258

Alternate gene names: NA

Gene position: 265249-264137 (Counterclockwise)

Preceding gene: 86604980

Following gene: 86604977

Centisome position: 9.04

GC content: 64.33

Gene sequence:

>1113_bases
ATGTCAGACGAAAATCTCCAGGGGGCAAGGCCAGGCCTGGGCAACGCAAAGTCGGCGGACGTCGTTGTCGTCGGGGCCGG
GGTGGCTGGCCTAGCCTGCGCACGGCAACTGCGGCGGGCGGGGCTGGAGGTCTTGGTGCTGGAGAAATCGGTGGGTTTGG
GTGGGCGCATGGCCACCCGGCGGGTTGAGCATGCCGGACAAACAGTGCCTGTAGATCACGGGGTTCAATACCTGACCGCC
GATTCCGACAGCTTTTATCGCTGGCTGAAGGAGCTATTGGGCCTGGGGCTGCTGAGGGAATGGACGCGCTCGTTGCACCT
GCTGGATCGAGAGGGGTTGCGCCCAGAGGACTCCAACGCCGAGAAACCCCGCTACATCTGCCCACAGGGCATGACGACGC
TGGCCAAACAGCTAGCCACCTCCTTGTCCATCCACACCCAGACGCGTGTGGTCGGCCTCAGGCCGCTGGCAACCACCTGG
CAATTACAGGCCGAAAACGGCCAGTGCTACGAGGCCGCGGCAGTGGTGATGGCAATCCCAGCTCCCCAGTTGTTGCCTTT
GCTGCAAGAGGGGATCCCTCCTGCCGACAACCTGCTCTCTCTGCCGGGATCCGCCGCCTACCAGCCCTGCATTGCCGTTT
TGGCCGGCTATTCGAAGAGCACGCCGCTGCCGCCTTGGAAGGGGATCAAGTGTTTGCAGGATCCGATGCTGGCCTGGCTG
GCCCTGGACAGCAGCAAGCGCCTACAGCCCTTGCCGCCGCTGGTGGTCTTGCACGGGGGGGCGGAGTGGTCGTCGCGGTA
TCTGGATGCCGGCCCCGCCGAGTTGGAAAAAGCTGGTCGAGAACTGCTGGATCACGCCGCCAAACGGCTGGATCCCTGGC
TGGCCTCGCCGCAATGGATGCAGGTGCATCGCTGGCGCTACGCTTTTCCTGTGGAAACGATAGGTTTGGCCAGCCTGGGC
ACCCACGTCCCTGCCGGTGCCGGCAAGGGGTTGCCGTTGGTCTGTGCCGGCGATTGGTGTGCCGGGGAGCGAGTAGAAGG
CGCCTGGCTCTCCGGCCAGGATGCTGCTAAAACCTTGCTGGAAATGCTGGGGATCCCTGCGCACGCCCGCTAA

Upstream 100 bases:

>100_bases
CATCAAGGGGGAAGCCAAGCTCTTCGGCGAAAGGGGCAACAACCCCTTTGGCAAGAGCGGGAGTTGAAGGTGGGATCCGG
TTGCAGCCGATAGGCCCTGT

Downstream 100 bases:

>100_bases
CGGCGCCATCAGAACCTCCGGGGTACTCCTGCCACAGCGCAGCTTGGCGGGATGGAGGATAGGCGGTGAGACGAAGGGGT
TCAATGCCCCTGAGTCTCAC

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: Transmembrane Protein; Amine Oxidase; NAD/FAD-Dependent Oxidoreductase; Flavin-Containing Amine-Oxidoreductase; NAD/Fad-Dependent Oxidoreductase Protein; FAD Dependent Oxidoreductase Domain Protein; Deoxyribodipyrimidine Photolyase; Amine Oxidase Flavin-Containing

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MSDENLQGARPGLGNAKSADVVVVGAGVAGLACARQLRRAGLEVLVLEKSVGLGGRMATRRVEHAGQTVPVDHGVQYLTA
DSDSFYRWLKELLGLGLLREWTRSLHLLDREGLRPEDSNAEKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLRPLATTW
QLQAENGQCYEAAAVVMAIPAPQLLPLLQEGIPPADNLLSLPGSAAYQPCIAVLAGYSKSTPLPPWKGIKCLQDPMLAWL
ALDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAGRELLDHAAKRLDPWLASPQWMQVHRWRYAFPVETIGLASLG
THVPAGAGKGLPLVCAGDWCAGERVEGAWLSGQDAAKTLLEMLGIPAHAR

Sequences:

>Translated_370_residues
MSDENLQGARPGLGNAKSADVVVVGAGVAGLACARQLRRAGLEVLVLEKSVGLGGRMATRRVEHAGQTVPVDHGVQYLTA
DSDSFYRWLKELLGLGLLREWTRSLHLLDREGLRPEDSNAEKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLRPLATTW
QLQAENGQCYEAAAVVMAIPAPQLLPLLQEGIPPADNLLSLPGSAAYQPCIAVLAGYSKSTPLPPWKGIKCLQDPMLAWL
ALDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAGRELLDHAAKRLDPWLASPQWMQVHRWRYAFPVETIGLASLG
THVPAGAGKGLPLVCAGDWCAGERVEGAWLSGQDAAKTLLEMLGIPAHAR
>Mature_369_residues
SDENLQGARPGLGNAKSADVVVVGAGVAGLACARQLRRAGLEVLVLEKSVGLGGRMATRRVEHAGQTVPVDHGVQYLTAD
SDSFYRWLKELLGLGLLREWTRSLHLLDREGLRPEDSNAEKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLRPLATTWQ
LQAENGQCYEAAAVVMAIPAPQLLPLLQEGIPPADNLLSLPGSAAYQPCIAVLAGYSKSTPLPPWKGIKCLQDPMLAWLA
LDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAGRELLDHAAKRLDPWLASPQWMQVHRWRYAFPVETIGLASLGT
HVPAGAGKGLPLVCAGDWCAGERVEGAWLSGQDAAKTLLEMLGIPAHAR

Specific function: Unknown

COG id: COG3380

COG function: function code R; Predicted NAD/FAD-dependent oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI237649117, Length=305, Percent_Identity=24.9180327868852, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI8922946, Length=308, Percent_Identity=24.6753246753247, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39810; Mature: 39679

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00139 THIOL_PROTEASE_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDENLQGARPGLGNAKSADVVVVGAGVAGLACARQLRRAGLEVLVLEKSVGLGGRMATR
CCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
RVEHAGQTVPVDHGVQYLTADSDSFYRWLKELLGLGLLREWTRSLHLLDREGLRPEDSNA
HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLRPLATTWQLQAENGQCYEAAAVVMAIP
CCCCEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHEEEEEECC
APQLLPLLQEGIPPADNLLSLPGSAAYQPCIAVLAGYSKSTPLPPWKGIKCLQDPMLAWL
CHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEH
ALDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAGRELLDHAAKRLDPWLASPQWM
CCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHH
QVHRWRYAFPVETIGLASLGTHVPAGAGKGLPLVCAGDWCAGERVEGAWLSGQDAAKTLL
HHHHEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
EMLGIPAHAR
HHHCCCCCCC
>Mature Secondary Structure 
SDENLQGARPGLGNAKSADVVVVGAGVAGLACARQLRRAGLEVLVLEKSVGLGGRMATR
CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH
RVEHAGQTVPVDHGVQYLTADSDSFYRWLKELLGLGLLREWTRSLHLLDREGLRPEDSNA
HHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLRPLATTWQLQAENGQCYEAAAVVMAIP
CCCCEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHEEEEEECC
APQLLPLLQEGIPPADNLLSLPGSAAYQPCIAVLAGYSKSTPLPPWKGIKCLQDPMLAWL
CHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEEH
ALDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAGRELLDHAAKRLDPWLASPQWM
CCCCCCCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHH
QVHRWRYAFPVETIGLASLGTHVPAGAGKGLPLVCAGDWCAGERVEGAWLSGQDAAKTLL
HHHHEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
EMLGIPAHAR
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA