| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86604838
Identifier: 86604838
GI number: 86604838
Start: 103453
End: 103701
Strand: Reverse
Name: 86604838
Synonym: CYA_0108
Alternate gene names: NA
Gene position: 103701-103453 (Counterclockwise)
Preceding gene: 86604841
Following gene: 86604837
Centisome position: 3.54
GC content: 57.03
Gene sequence:
>249_bases TTGCGTTTTCTTTTCGGAGTATTCGAGAATACTCACCCCTCCCAATTCGAGCCTGGCAGACCAACCGCCAATTTTTGCCG ATTTTTAATGCTGAGGTTTGGGTATTCTGCAAACTACCCCACGGCTAAAGCCGAAGGCTTCTGCGCCGAAAGAGCCGGTG GGGGGGTGCCGTCGGGGATCCGCGCCATGGGCTTAGAGCGGCTGCAAATGGATCTCGGCGTTCAGCCGCTGGCACAGGGA TCCCCCTGA
Upstream 100 bases:
>100_bases TATTCCCGAACACCTAGTAGATAGAGCCCAAATTAGGACGAACTGTTGCCCCCAGCGCGCTTCGGTCGGAGCTGAGCTTG CGCTTGCCTAAAAGCTAACT
Downstream 100 bases:
>100_bases TCCTGCGCCGTCGTCCTGCTGGCCAGGGCCTCTACCACTTCGTCGGAGTTGGCAGTCAGCACCACAACGGGGCGCTCGCA GGCGAGGGGGAAAGCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MRFLFGVFENTHPSQFEPGRPTANFCRFLMLRFGYSANYPTAKAEGFCAERAGGGVPSGIRAMGLERLQMDLGVQPLAQG SP
Sequences:
>Translated_82_residues MRFLFGVFENTHPSQFEPGRPTANFCRFLMLRFGYSANYPTAKAEGFCAERAGGGVPSGIRAMGLERLQMDLGVQPLAQG SP >Mature_82_residues MRFLFGVFENTHPSQFEPGRPTANFCRFLMLRFGYSANYPTAKAEGFCAERAGGGVPSGIRAMGLERLQMDLGVQPLAQG SP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8957; Mature: 8957
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLFGVFENTHPSQFEPGRPTANFCRFLMLRFGYSANYPTAKAEGFCAERAGGGVPSGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH RAMGLERLQMDLGVQPLAQGSP HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRFLFGVFENTHPSQFEPGRPTANFCRFLMLRFGYSANYPTAKAEGFCAERAGGGVPSGI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH RAMGLERLQMDLGVQPLAQGSP HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA