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The map label for this gene is yafV [C]

Identifier: 86604790

GI number: 86604790

Start: 57735

End: 58562

Strand: Reverse

Name: yafV [C]

Synonym: CYA_0058

Alternate gene names: 86604790

Gene position: 58562-57735 (Counterclockwise)

Preceding gene: 86604791

Following gene: 86604789

Centisome position: 2.0

GC content: 63.16

Gene sequence:

>828_bases
ATGCGATCCTACTTGGCAGCCGCCCTGCAGATGACCAGCACCCCCGATCTGGCCGGCAACTTGCAACAGGCAGAGGAGTG
GATTGACTTTGCGGCGCGCCGGGGCTGTGAGCTGGTGACCTTGCCGGAAAACTTTGCCTTCATGGGGCCGGAGGAAGAAA
AAGCCCGCCTTGCGCCGGAGATTGCGCAGCGGGCCGAAGAGTTTTTGGCCAAGATGGCCCAGCGCTACCAGGTGTTTGTG
CTGGGCGGGGGATACCCGGTGCCGGATGGACAGGGCAAGGTGTACAACACGGCGGCCCTCTACAGCCCCGAGGGCAAGGA
GCTGGCCCGCTACCGCAAGATCCACCTCTTCGACGTCAACCTGCCCGACGGCAACACCTACCGCGAGTCGAACACGGTGG
TGAGCGGCAACGAGGTGGTTGTCTGCCAGGAGGAGCGGCTAGGCACCCTTGGTTTGTCGGTCTGTTACGACGTGCGCTTT
CCTGAGCTATATCGCTCCTTGGTGGATCGAGGGGCAGAAGTGTTGTTGATCCCCGCCGCCTTTACCGCCTACACGGGTCG
GGATCACTGGCAGGTTTTGCTGCAGTGTCGGGCCATTGAAAACACCTGCTACGTGATCGCCCCCGCCCAGGTGGGCACCC
ACTACGAGCGGCGACAATGTCATGGCCACGCCATGATCGTGGATCCCTGGGGGACGATCCTGGCGGATGCCGGCGGCGAA
AAACCAGGAGTGGCCATTGCCGAGATCGCCCCAGAGCGGCTACAGCTTATCCGGCGGCAGATGCCCTCGCTGCAACACCG
CCGGCTGGCCTGTGCCGTTACTCCCTAG

Upstream 100 bases:

>100_bases
CATTGTCTGGGTGGTGGTGCGATTTGTGGGGCCTGCCCTGGGCTGGTGGCACCTGGTGGGCTAGCCGGCTGGATCCCTTG
AGTCTCCTTGGAGTTTTCCT

Downstream 100 bases:

>100_bases
GGATCCCCTATGCCTTGGCCGCCGCTGATTCTCTACAGCAAGCCCGGATGCCACCTCTGCGAGGGCCTAGCGGAGAAATT
GCGGCAGATCCCCGAAATCG

Product: carbon-nitrogen family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRSYLAAALQMTSTPDLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEEKARLAPEIAQRAEEFLAKMAQRYQVFV
LGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVNLPDGNTYRESNTVVSGNEVVVCQEERLGTLGLSVCYDVRF
PELYRSLVDRGAEVLLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEIAPERLQLIRRQMPSLQHRRLACAVTP

Sequences:

>Translated_275_residues
MRSYLAAALQMTSTPDLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEEKARLAPEIAQRAEEFLAKMAQRYQVFV
LGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVNLPDGNTYRESNTVVSGNEVVVCQEERLGTLGLSVCYDVRF
PELYRSLVDRGAEVLLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEIAPERLQLIRRQMPSLQHRRLACAVTP
>Mature_275_residues
MRSYLAAALQMTSTPDLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEEKARLAPEIAQRAEEFLAKMAQRYQVFV
LGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVNLPDGNTYRESNTVVSGNEVVVCQEERLGTLGLSVCYDVRF
PELYRSLVDRGAEVLLIPAAFTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
KPGVAIAEIAPERLQLIRRQMPSLQHRRLACAVTP

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI297632350, Length=270, Percent_Identity=40.7407407407407, Blast_Score=194, Evalue=8e-50,
Organism=Homo sapiens, GI297632348, Length=270, Percent_Identity=40.7407407407407, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI5031947, Length=270, Percent_Identity=40.7407407407407, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI9910460, Length=272, Percent_Identity=33.8235294117647, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI297632346, Length=193, Percent_Identity=36.2694300518135, Blast_Score=112, Evalue=4e-25,
Organism=Escherichia coli, GI1786412, Length=259, Percent_Identity=30.1158301158301, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17556280, Length=268, Percent_Identity=39.1791044776119, Blast_Score=193, Evalue=9e-50,
Organism=Saccharomyces cerevisiae, GI6322335, Length=298, Percent_Identity=33.5570469798658, Blast_Score=171, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6323383, Length=271, Percent_Identity=32.4723247232472, Blast_Score=165, Evalue=7e-42,
Organism=Drosophila melanogaster, GI17933642, Length=271, Percent_Identity=37.2693726937269, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI21355835, Length=272, Percent_Identity=31.25, Blast_Score=150, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30624; Mature: 30624

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYLAAALQMTSTPDLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEEKARLAPE
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHH
IAQRAEEFLAKMAQRYQVFVLGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVN
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHEEEEEEEEEE
LPDGNTYRESNTVVSGNEVVVCQEERLGTLGLSVCYDVRFPELYRSLVDRGAEVLLIPAA
CCCCCCCCCCCCEECCCEEEEECCCCCCEECEEEEEECCCHHHHHHHHHCCCEEEEEECH
FTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
HEECCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHCCCEEEECCCHHHHCCCCCC
KPGVAIAEIAPERLQLIRRQMPSLQHRRLACAVTP
CCCEEHHHCCHHHHHHHHHHCCCHHHCEEEEEECC
>Mature Secondary Structure
MRSYLAAALQMTSTPDLAGNLQQAEEWIDFAARRGCELVTLPENFAFMGPEEEKARLAPE
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHH
IAQRAEEFLAKMAQRYQVFVLGGGYPVPDGQGKVYNTAALYSPEGKELARYRKIHLFDVN
HHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHEEEEEEEEEE
LPDGNTYRESNTVVSGNEVVVCQEERLGTLGLSVCYDVRFPELYRSLVDRGAEVLLIPAA
CCCCCCCCCCCCEECCCEEEEECCCCCCEECEEEEEECCCHHHHHHHHHCCCEEEEEECH
FTAYTGRDHWQVLLQCRAIENTCYVIAPAQVGTHYERRQCHGHAMIVDPWGTILADAGGE
HEECCCCHHHHHHHHHHCCCCEEEEEECHHHCCCHHHHHHCCCEEEECCCHHHHCCCCCC
KPGVAIAEIAPERLQLIRRQMPSLQHRRLACAVTP
CCCEEHHHCCHHHHHHHHHHCCCHHHCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]