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The map label for this gene is selD

Identifier: 86604787

GI number: 86604787

Start: 52802

End: 53860

Strand: Reverse

Name: selD

Synonym: CYA_0055

Alternate gene names: 86604787

Gene position: 53860-52802 (Counterclockwise)

Preceding gene: 86604789

Following gene: 86604786

Centisome position: 1.84

GC content: 64.59

Gene sequence:

>1059_bases
ATGGACACTCCCCTTCGCCTCACCCAGTACTCCCACGGCGGCGGCTGCGGCTGTAAAATCGCCCCGGCGCTGCTGCAGCA
GATTCTCAAAGAGCTGCCCCTTTTCTGGTCGGATCCGGCGCTGCTGGTGGGATCCGAGACCAGCGACGATGCCGCCGTCT
ACCAACTCAACGACGAGCAGACCCTGATCCTGACCACCGACTTTTTCATGCCCATTGTGGACGATCCGGTGGATTTTGGC
CGCATCGCCGCCGCCAACGCCCTTTCCGATGTTTACGCGATGGGGGGCACGCCCATTCTCGCCCTGGCCATTTTGGGCAT
GCCGGTCGACAGGTTGCCCCTGTCGGCCATTCGGGAGATCATGGCCGGGGGAATCAAGGTCTGTCAGGAAGCCGGGATCC
CTTTGGCCGGGGGGCACTCCATCGATTCGCCCGAGCCCATCTTCGGCCTGGTGGCGGCAGGGCTGGCCCACCCGCAGCAC
ATCCGCCGCAACGCCACCGCCCGGCCCGGCGACGATCTCATCCTCACCAAGCCGCTGGGGATCGGGGTGATGACCACCGC
CCTGAAAAAGGGCCAGCTCAGCGCGGCAGGCTACGCGGAAGTTTTGCAGGTGATGACTCAGCTCAACCGCATCGGCCCGC
AACTGGCGCAGCGAGCCCAGGTTCGCGCCCTAACCGATGTAACGGGGTTTGGCCTTTTGGGACATCTGCTGGAAGTCTGC
CGGGGCTCGGGGGTGAGCGCCGAGCTGGATTTGGCTGCCATTCCGTTTTTGACCGAAGCGCTCTCCTTAGCTGAAGCTGG
GATCTTCCCCGGCGCAGCCCGGCGCAACTGGCAGGGCTATGAGGGAGTAGAGGCCAACTCTCTGCCGGAGTGGCAGCAGT
TGCTCTTGTCGGATCCGCAAACCAGCGGCGGCTTGCTGGTGGCGGTGGATCCCGCCTACACCGCAGAGCTTTTGCAAGAG
CTCCACAGCGCCGGCTACTCTTACGCCCGTCGCATTGGCCGCTGCCAGGCCGGCGAAGGGATCGCCATCCGGGTTGTCGG
CGAGATGCCGGTAGCTTGA

Upstream 100 bases:

>100_bases
AGGATCTTTCTTACCTTAACTCGGTGTGCCCATTTCCCGGCTGCCTGCAGGTGTGGCTACAGTGAGATCAATCAAGCTTG
TGTTTTCTCCTTTTGCCTAA

Downstream 100 bases:

>100_bases
GTGAAGCCTATATTCGGCCCTCTCCTGCCAATATGAAGATTCGGTCAAGCAGAGCTGCGAAAGTTGAAGATCTCATGTAA
GGGTAAGGGGAGCTGAGATA

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MDTPLRLTQYSHGGGCGCKIAPALLQQILKELPLFWSDPALLVGSETSDDAAVYQLNDEQTLILTTDFFMPIVDDPVDFG
RIAAANALSDVYAMGGTPILALAILGMPVDRLPLSAIREIMAGGIKVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPQH
IRRNATARPGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGPQLAQRAQVRALTDVTGFGLLGHLLEVC
RGSGVSAELDLAAIPFLTEALSLAEAGIFPGAARRNWQGYEGVEANSLPEWQQLLLSDPQTSGGLLVAVDPAYTAELLQE
LHSAGYSYARRIGRCQAGEGIAIRVVGEMPVA

Sequences:

>Translated_352_residues
MDTPLRLTQYSHGGGCGCKIAPALLQQILKELPLFWSDPALLVGSETSDDAAVYQLNDEQTLILTTDFFMPIVDDPVDFG
RIAAANALSDVYAMGGTPILALAILGMPVDRLPLSAIREIMAGGIKVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPQH
IRRNATARPGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGPQLAQRAQVRALTDVTGFGLLGHLLEVC
RGSGVSAELDLAAIPFLTEALSLAEAGIFPGAARRNWQGYEGVEANSLPEWQQLLLSDPQTSGGLLVAVDPAYTAELLQE
LHSAGYSYARRIGRCQAGEGIAIRVVGEMPVA
>Mature_352_residues
MDTPLRLTQYSHGGGCGCKIAPALLQQILKELPLFWSDPALLVGSETSDDAAVYQLNDEQTLILTTDFFMPIVDDPVDFG
RIAAANALSDVYAMGGTPILALAILGMPVDRLPLSAIREIMAGGIKVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPQH
IRRNATARPGDDLILTKPLGIGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGPQLAQRAQVRALTDVTGFGLLGHLLEVC
RGSGVSAELDLAAIPFLTEALSLAEAGIFPGAARRNWQGYEGVEANSLPEWQQLLLSDPQTSGGLLVAVDPAYTAELLQE
LHSAGYSYARRIGRCQAGEGIAIRVVGEMPVA

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=357, Percent_Identity=29.9719887955182, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI15011844, Length=286, Percent_Identity=29.020979020979, Blast_Score=104, Evalue=1e-22,
Organism=Escherichia coli, GI1788062, Length=340, Percent_Identity=51.1764705882353, Blast_Score=326, Evalue=1e-90,
Organism=Caenorhabditis elegans, GI17543426, Length=359, Percent_Identity=30.3621169916435, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24653602, Length=373, Percent_Identity=27.8820375335121, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653604, Length=373, Percent_Identity=27.8820375335121, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28574119, Length=292, Percent_Identity=29.4520547945205, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28574118, Length=263, Percent_Identity=31.9391634980989, Blast_Score=98, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 37092; Mature: 37092

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTPLRLTQYSHGGGCGCKIAPALLQQILKELPLFWSDPALLVGSETSDDAAVYQLNDEQ
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEECCCC
TLILTTDFFMPIVDDPVDFGRIAAANALSDVYAMGGTPILALAILGMPVDRLPLSAIREI
EEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH
MAGGIKVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPQHIRRNATARPGDDLILTKPLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCC
IGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGPQLAQRAQVRALTDVTGFGLLGHLLEVC
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSGVSAELDLAAIPFLTEALSLAEAGIFPGAARRNWQGYEGVEANSLPEWQQLLLSDPQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TSGGLLVAVDPAYTAELLQELHSAGYSYARRIGRCQAGEGIAIRVVGEMPVA
CCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MDTPLRLTQYSHGGGCGCKIAPALLQQILKELPLFWSDPALLVGSETSDDAAVYQLNDEQ
CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEEEECCCC
TLILTTDFFMPIVDDPVDFGRIAAANALSDVYAMGGTPILALAILGMPVDRLPLSAIREI
EEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHH
MAGGIKVCQEAGIPLAGGHSIDSPEPIFGLVAAGLAHPQHIRRNATARPGDDLILTKPLG
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCC
IGVMTTALKKGQLSAAGYAEVLQVMTQLNRIGPQLAQRAQVRALTDVTGFGLLGHLLEVC
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSGVSAELDLAAIPFLTEALSLAEAGIFPGAARRNWQGYEGVEANSLPEWQQLLLSDPQ
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
TSGGLLVAVDPAYTAELLQELHSAGYSYARRIGRCQAGEGIAIRVVGEMPVA
CCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA