Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361290

Identifier: 86361290

GI number: 86361290

Start: 628298

End: 628687

Strand: Reverse

Name: 86361290

Synonym: RHE_PF00562

Alternate gene names: NA

Gene position: 628687-628298 (Counterclockwise)

Preceding gene: 86361292

Following gene: 86361289

Centisome position: 97.85

GC content: 57.44

Gene sequence:

>390_bases
ATGGACATGGAAAAGCGTGATCTGATCCTTGGCGAAGATTGCGCATGGTTTGACCGGACGCCGAATTCAGCCGACGCTGG
CCTGAGGCAATGTCTCACTTCCGACGGCATCCCGCTGGTTGACAAACATTGGTCAGGTTGGGGCGGTGAAACTTTCATAA
TCGTGGCCTTGACCCGCCGGACTGTGAGCCTGGAGGAACTGCAACCGCCTCGTGATTATCTCGATCCCGCAGCCGGGGGA
TTCGCTGGGGTAAGTTGGGACGAGATGGCTAGTGAAAGAGCTTGCCCGCAAAAGGCGGGACGTGAGTGCCGGATGAGGGC
TGCGACGTCGGACCGACTCTCCACCGCTCACTCTGCACTTGAAGGCGTTTTTGGCTATCGGCTTAAGTAA

Upstream 100 bases:

>100_bases
CTAGTAATCCGCATCCAGCAGAGCGCGTAGGTTCGAAGCTGTCCGCTCGCCGAGGAACCCAGGGTCGTTCTTGAAGAGCT
TTCGAGATGCGTATGGCATG

Downstream 100 bases:

>100_bases
AGGCCCGCAGTTCGAATACGGCCAGGCGGCGAGACGGCCGGTACGACGTCTACTAAGGCCCTTATTGGGACTGCCCTTTG
TGCTAGGATCGATTACATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDMEKRDLILGEDCAWFDRTPNSADAGLRQCLTSDGIPLVDKHWSGWGGETFIIVALTRRTVSLEELQPPRDYLDPAAGG
FAGVSWDEMASERACPQKAGRECRMRAATSDRLSTAHSALEGVFGYRLK

Sequences:

>Translated_129_residues
MDMEKRDLILGEDCAWFDRTPNSADAGLRQCLTSDGIPLVDKHWSGWGGETFIIVALTRRTVSLEELQPPRDYLDPAAGG
FAGVSWDEMASERACPQKAGRECRMRAATSDRLSTAHSALEGVFGYRLK
>Mature_129_residues
MDMEKRDLILGEDCAWFDRTPNSADAGLRQCLTSDGIPLVDKHWSGWGGETFIIVALTRRTVSLEELQPPRDYLDPAAGG
FAGVSWDEMASERACPQKAGRECRMRAATSDRLSTAHSALEGVFGYRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14263; Mature: 14263

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEKRDLILGEDCAWFDRTPNSADAGLRQCLTSDGIPLVDKHWSGWGGETFIIVALTRR
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
TVSLEELQPPRDYLDPAAGGFAGVSWDEMASERACPQKAGRECRMRAATSDRLSTAHSAL
EECHHHCCCCHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHH
EGVFGYRLK
HHHHHCCCC
>Mature Secondary Structure
MDMEKRDLILGEDCAWFDRTPNSADAGLRQCLTSDGIPLVDKHWSGWGGETFIIVALTRR
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
TVSLEELQPPRDYLDPAAGGFAGVSWDEMASERACPQKAGRECRMRAATSDRLSTAHSAL
EECHHHCCCCHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHH
EGVFGYRLK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA