Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is fixHf

Identifier: 86361231

GI number: 86361231

Start: 566381

End: 566863

Strand: Reverse

Name: fixHf

Synonym: RHE_PF00502

Alternate gene names: 86361231

Gene position: 566863-566381 (Counterclockwise)

Preceding gene: 86361232

Following gene: 86361230

Centisome position: 88.23

GC content: 60.66

Gene sequence:

>483_bases
ATGAAGGCTTCCAGAGGTTTTACCGGCTGGCACATGCTGCTTGCCACCTCCGCATTCTTCGCCGTGGTGATCGCCGTCAA
CGTCACCATGGCCGTCTATGCCTCGTCCAGCTGGAGCGGCCTGGTCGTGGAAAATACCTATGTGGCCAGCCAGGAATTCA
ACGGCAAGGCGGCAGCGATGAAGGCGATGGCCGCCTCCGGCATCGAAGGCGCTCTCTTCCTCAAGGGCAGCGAAATCCGC
TACGACATCCACGAACAGGGGGGTGCGCCTGCGATCATCGACGAGGTCACGCTGAATTTCAAACGGCCCGTCGGCGATCA
TGAGGATTTCAGCCTGGCGCTTCGCAAGACGGGCGAAGGGCGGTTCGAAGCCGATCACGAAGTCGCCGGCGGCGACTGGA
TCGTCGAAGCCATATCGAGACGAAACGGCATGGTCGTCATGCACGAGGCCAAGCGCTTCGATACCACGGAGTTCGGCCAA
TGA

Upstream 100 bases:

>100_bases
ACGGAGCCGCGATCAAAGAATTCCTCTTCGTCATCGAGGATACCGACCATGCCGACCGGGCGACCTATCGCGCCGCGTTC
AATGCACCGGGAGACGTGAA

Downstream 100 bases:

>100_bases
CCTGCTGCTCCATGGACACGGAGAGCGTTCTCGCCCTCAGCACGGCATCCTCCAGCGCCGAAGAAGTCCGCCTTGCCAGC
CATTCGCTCGGGGCCGGATT

Product: cation pump membrane (nitrogen fixation)protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR
YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ

Sequences:

>Translated_160_residues
MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR
YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ
>Mature_160_residues
MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR
YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ

Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]

COG id: COG5456

COG function: function code P; Predicted integral membrane protein linked to a cation pump

Gene ontology:

Cell location: Cell membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008620
- InterPro:   IPR018037 [H]

Pfam domain/function: PF05751 FixH [H]

EC number: NA

Molecular weight: Translated: 17364; Mature: 17364

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECEEEECCCCCCHHHHH
KAMAASGIEGALFLKGSEIRYDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEG
HHHHHCCCCEEEEEECCCEEEEHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCC
RFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ
CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECEEEECCCCCCHHHHH
KAMAASGIEGALFLKGSEIRYDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEG
HHHHHCCCCEEEEEECCCEEEEHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCC
RFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ
CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2536685; 11481432 [H]