| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is fixHf
Identifier: 86361231
GI number: 86361231
Start: 566381
End: 566863
Strand: Reverse
Name: fixHf
Synonym: RHE_PF00502
Alternate gene names: 86361231
Gene position: 566863-566381 (Counterclockwise)
Preceding gene: 86361232
Following gene: 86361230
Centisome position: 88.23
GC content: 60.66
Gene sequence:
>483_bases ATGAAGGCTTCCAGAGGTTTTACCGGCTGGCACATGCTGCTTGCCACCTCCGCATTCTTCGCCGTGGTGATCGCCGTCAA CGTCACCATGGCCGTCTATGCCTCGTCCAGCTGGAGCGGCCTGGTCGTGGAAAATACCTATGTGGCCAGCCAGGAATTCA ACGGCAAGGCGGCAGCGATGAAGGCGATGGCCGCCTCCGGCATCGAAGGCGCTCTCTTCCTCAAGGGCAGCGAAATCCGC TACGACATCCACGAACAGGGGGGTGCGCCTGCGATCATCGACGAGGTCACGCTGAATTTCAAACGGCCCGTCGGCGATCA TGAGGATTTCAGCCTGGCGCTTCGCAAGACGGGCGAAGGGCGGTTCGAAGCCGATCACGAAGTCGCCGGCGGCGACTGGA TCGTCGAAGCCATATCGAGACGAAACGGCATGGTCGTCATGCACGAGGCCAAGCGCTTCGATACCACGGAGTTCGGCCAA TGA
Upstream 100 bases:
>100_bases ACGGAGCCGCGATCAAAGAATTCCTCTTCGTCATCGAGGATACCGACCATGCCGACCGGGCGACCTATCGCGCCGCGTTC AATGCACCGGGAGACGTGAA
Downstream 100 bases:
>100_bases CCTGCTGCTCCATGGACACGGAGAGCGTTCTCGCCCTCAGCACGGCATCCTCCAGCGCCGAAGAAGTCCGCCTTGCCAGC CATTCGCTCGGGGCCGGATT
Product: cation pump membrane (nitrogen fixation)protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ
Sequences:
>Translated_160_residues MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ >Mature_160_residues MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAMKAMAASGIEGALFLKGSEIR YDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEGRFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ
Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG5456
COG function: function code P; Predicted integral membrane protein linked to a cation pump
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008620 - InterPro: IPR018037 [H]
Pfam domain/function: PF05751 FixH [H]
EC number: NA
Molecular weight: Translated: 17364; Mature: 17364
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECEEEECCCCCCHHHHH KAMAASGIEGALFLKGSEIRYDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEG HHHHHCCCCEEEEEECCCEEEEHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCC RFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MKASRGFTGWHMLLATSAFFAVVIAVNVTMAVYASSSWSGLVVENTYVASQEFNGKAAAM CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECEEEECCCCCCHHHHH KAMAASGIEGALFLKGSEIRYDIHEQGGAPAIIDEVTLNFKRPVGDHEDFSLALRKTGEG HHHHHCCCCEEEEEECCCEEEEHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCC RFEADHEVAGGDWIVEAISRRNGMVVMHEAKRFDTTEFGQ CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]