| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is fixSf
Identifier: 86361229
GI number: 86361229
Start: 563944
End: 564102
Strand: Reverse
Name: fixSf
Synonym: RHE_PF00500
Alternate gene names: 86361229
Gene position: 564102-563944 (Counterclockwise)
Preceding gene: 86361230
Following gene: 86361228
Centisome position: 87.8
GC content: 56.6
Gene sequence:
>159_bases ATGAACATGCTGATCTATCTGATACCGATTGCGCTGCTCATGGGCGGAATAGGCCTCCTGGCATTCCTCTGGTCGTTGAA GAGCGGCCAGTATGACGACCTTGAGGGCGCCGCCTGGCGAATCCTGGCCGAGGACGAAACCGATCGGAAGAAATCCTGA
Upstream 100 bases:
>100_bases TCATCGTCGTAACAAATGCGCTGCGGCTGAACGCTTTCGGCAAGCGGACCGGCCCGCGGACCGAGGCGCGCGCCGGCGGC AATCCGGAGGTCAAACCCGC
Downstream 100 bases:
>100_bases ACCGTACACGCCAAACGAAAGGACGATCGATGCTTGCGAAAAATCCCGCGCTTTTGCGGTCTGACCTGTTCGACGGGCTG GATGAGGCAACGGTGGAGAA
Product: membrane protein precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLEGAAWRILAEDETDRKKS
Sequences:
>Translated_52_residues MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLEGAAWRILAEDETDRKKS >Mature_52_residues MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLEGAAWRILAEDETDRKKS
Specific function: The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004714 [H]
Pfam domain/function: PF03597 CcoS [H]
EC number: NA
Molecular weight: Translated: 5842; Mature: 5842
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLEGAAWRILAEDETDRKKS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MNMLIYLIPIALLMGGIGLLAFLWSLKSGQYDDLEGAAWRILAEDETDRKKS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]