Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86361216

Identifier: 86361216

GI number: 86361216

Start: 547577

End: 548101

Strand: Reverse

Name: 86361216

Synonym: RHE_PF00486

Alternate gene names: NA

Gene position: 548101-547577 (Counterclockwise)

Preceding gene: 86361217

Following gene: 86361210

Centisome position: 85.31

GC content: 67.05

Gene sequence:

>525_bases
ATGACGCTCGCCGTTTCATGCGACGAGGCGTCCGTTGCTTGGAGAAGTGAGCGCGGCCGTCGACATCATCAATGGCGGCG
CCGGCGAAATGCGGGTCGCCTCCGGCGATCTATCGCAGCGCACCGAGCAGCAGGCGGCCTCGCTGCAGGAAACCTCCTCG
GCGCTGGAGGAAATTGCCGTCGCGATAAAGCGGTCGACCGGGCTTTCCGAAGTCTCGACCGCCCTCAACCAGATGGATCA
GGTGACGCAGCAGAACGCGGCGATGGTGGAGCAATCCACGGCGGCGGCAAACCGGCTGGCGGAGGAGGCTGCGAATCTCG
CCCGCCTGATTGCCCGCTTCAAGCTCGACGCCGCCCAGACGGCGCCGCGCGCCATCACATCCGAAAACCGCCCGGCGCCT
TCGCCGGCGCGGGCCCTCGGCCGCAAGCTCGCCGGCGCCTTCGGCGCAAAAGCTGCGACGGCAGCTGCCGCAGCATCGTG
GGAGGAGTGCTGAGAAGAAGCGATTGGCCAAATTCGTTGCCGTGA

Upstream 100 bases:

>100_bases
AACATTCTCGAAGAGCCGATGGAGCGCAAAGGGCCCGCTGACATCATGCCCTTCGAAATCAGGACCTGGAGGCTGCAGAA
GGCCTGACGCTGCCTGCAAG

Downstream 100 bases:

>100_bases
ACCTGGCCTTCACCGGCTTACGGTCTTTGTGCGCCGGTCGTGGCAACGTAGACGGAATAGAGTGAGCGCGTTGCGGCTAT
GAACAGGCGGTTGCGTCCCG

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGS
GDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIV
GGVLRRSDWPNSLP

Sequences:

>Translated_174_residues
MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGS
GDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIV
GGVLRRSDWPNSLP
>Mature_173_residues
TLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGSG
DAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVG
GVLRRSDWPNSLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18597; Mature: 18466

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCR
CEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCC
RDKAVDRAFRSLDRPQPDGSGDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCC
GAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVGGVLRRSDWPNSLP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCR
EEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCC
RDKAVDRAFRSLDRPQPDGSGDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCC
GAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVGGVLRRSDWPNSLP
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA