| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361216
Identifier: 86361216
GI number: 86361216
Start: 547577
End: 548101
Strand: Reverse
Name: 86361216
Synonym: RHE_PF00486
Alternate gene names: NA
Gene position: 548101-547577 (Counterclockwise)
Preceding gene: 86361217
Following gene: 86361210
Centisome position: 85.31
GC content: 67.05
Gene sequence:
>525_bases ATGACGCTCGCCGTTTCATGCGACGAGGCGTCCGTTGCTTGGAGAAGTGAGCGCGGCCGTCGACATCATCAATGGCGGCG CCGGCGAAATGCGGGTCGCCTCCGGCGATCTATCGCAGCGCACCGAGCAGCAGGCGGCCTCGCTGCAGGAAACCTCCTCG GCGCTGGAGGAAATTGCCGTCGCGATAAAGCGGTCGACCGGGCTTTCCGAAGTCTCGACCGCCCTCAACCAGATGGATCA GGTGACGCAGCAGAACGCGGCGATGGTGGAGCAATCCACGGCGGCGGCAAACCGGCTGGCGGAGGAGGCTGCGAATCTCG CCCGCCTGATTGCCCGCTTCAAGCTCGACGCCGCCCAGACGGCGCCGCGCGCCATCACATCCGAAAACCGCCCGGCGCCT TCGCCGGCGCGGGCCCTCGGCCGCAAGCTCGCCGGCGCCTTCGGCGCAAAAGCTGCGACGGCAGCTGCCGCAGCATCGTG GGAGGAGTGCTGAGAAGAAGCGATTGGCCAAATTCGTTGCCGTGA
Upstream 100 bases:
>100_bases AACATTCTCGAAGAGCCGATGGAGCGCAAAGGGCCCGCTGACATCATGCCCTTCGAAATCAGGACCTGGAGGCTGCAGAA GGCCTGACGCTGCCTGCAAG
Downstream 100 bases:
>100_bases ACCTGGCCTTCACCGGCTTACGGTCTTTGTGCGCCGGTCGTGGCAACGTAGACGGAATAGAGTGAGCGCGTTGCGGCTAT GAACAGGCGGTTGCGTCCCG
Product: putative methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGS GDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIV GGVLRRSDWPNSLP
Sequences:
>Translated_174_residues MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGS GDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIV GGVLRRSDWPNSLP >Mature_173_residues TLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCRRDKAVDRAFRSLDRPQPDGSG DAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPDGAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVG GVLRRSDWPNSLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18597; Mature: 18466
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCR CEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCC RDKAVDRAFRSLDRPQPDGSGDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCC GAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVGGVLRRSDWPNSLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLAVSCDEASVAWRSERGRRHHQWRRRRNAGRLRRSIAAHRAAGGLAAGNLLGAGGNCR EEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCC RDKAVDRAFRSLDRPQPDGSGDAAERGDGGAIHGGGKPAGGGGCESRPPDCPLQARRRPD HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCC GAARHHIRKPPGAFAGAGPRPQARRRLRRKSCDGSCRSIVGGVLRRSDWPNSLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA