| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361172
Identifier: 86361172
GI number: 86361172
Start: 494177
End: 495604
Strand: Direct
Name: 86361172
Synonym: RHE_PF00442
Alternate gene names: NA
Gene position: 494177-495604 (Clockwise)
Preceding gene: 86361171
Following gene: 86361173
Centisome position: 76.91
GC content: 60.29
Gene sequence:
>1428_bases ATGACAGTTGCGCTTTGGAGTCAGTCAATGACGGGTGCGAACCCGGCCCATATCGGCGCCAATGCGCCTACAGTCAAACC GAGGCCTGCCTTCGCGCAGACGGATCTGGTCGCATTGTCGCGCTATTTTTCTCTTCTGATGATGCGCAACATCACCAGCG ATGGCTATGTCATCGAGGATCCCACATCGCCCGGCGTCTTTTCGGCCCCGGGCTGCGTCATCGCCGCACCCTCCTATCCA GCGAACACGCCGGGTGTCGACCAGGACTATGTTTTCAACTGGGTCCGCGACGGGGCCATTACGGCCATCGAGATCGCGCT TGCCGGCTTGTTACCCATTCCGGGCGGAGTTTTGCCGAGCCTGGTCGACTACGTGAACTTCGCCGCGCTCTGCCAGGCGA ATGCGAAGAATTCCGACACCGTCACACTTGGCCACGCCTGCTTCACCATCACCGGCGAGGTTCGTCCGTGGTCGGAGCAG AATGACGGGCCGGCCATTCAGTCGATTGCGATCCTCACCCTGTTCGATCAGCTGGATGGCGCCACGCAGACGATCGCCAA ACAACTGGTCCAGGCCAACCTCGCTTATCTTCTCGAAGTTTACCAGAACAAGACCACAAATCTCTGGGAGGAATATGAGG GCTATTCGTTTTTCGCAAGAGCCGTACAGCTCCGCTTTTTCCGGGAAATTTCCACAAACACGATCGGCATTGCGGTGCCT GCCGGGGTGGCCGGCGCCATCTCCTGGCTGGAAAGCCAGCTGGCAACCCACTGGAACGGGCAGCTCTATGTGAGCATTCT GGATGCCCTGGAGCAAGCCGGTTACGACGCGAACATCGATATCGTCTCTTCGGTCTGCTATGGCGGGATCGAGCCAACCG ATACCAAGCTTCTGGCAACGGCGGCCATCTTGCGGCGCCAGTGGGCCGATCCTTCGTCTTCGAACTATTACCCGGTCAAT GGCGCCGACGCGGCCAAAGGGCTCGGACCACTCTTCGGGCGCTATCCAGGCGACCATTACGATGGCGATGTGGCGGCTCC GGTTGCCGGCGGGCATCCCTGGGCTCTGTGCACCGCCAATTTCGCCGAGTTTCAATATCGGCTTGCCAATGCCATCGATG CCAGCGGCGCCATCCCCCTCGATCAGTTCTCCGAACCCTTCTTCGCGGAAATGGGACTTGGCGCATCGAGCAGCGCCGCC GACGCGTCGGCTGCTTTGCGGGCTTCGTCTGACGCCATGCTGCGCGCCATCGTCTACCACAGCGATTACTATGAACTGAG CGAACAGTTCGATGGAACCGTTGGCTACGAGAAAAGCGTCCGGAATCTGACCTGGAGCTATGCCTCCTTCCTCTCGGCAG TCAGAGCCCGCGCCGCCGCCCCGGCCACCAAGTCCAAGCCCCGAAACTCTCGCGGCCCGAAATCATGA
Upstream 100 bases:
>100_bases CACTCTCGACACCCATTCGGCCGCAATATTTCGCTCATCCGGTCCGGAATATTTTGTCGATCTGGTCCCGGCAAGTCTCA ACCGATCTTGGAGTCTGTCA
Downstream 100 bases:
>100_bases CGATTGAAGGCCGTAGGGCCTGATCTCGATTGAGTCCAGAACGCATGATCCGCAAAGCCCTGATCGGCTTTCCGGGATTA ATGGAGGACCAAAGTGCTTT
Product: putative glucoamylase protein
Products: D-glucuronate; alcohol
Alternate protein names: Glucoamylase Protein; Glucan 1 4-Alpha-Glucosidase
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTVALWSQSMTGANPAHIGANAPTVKPRPAFAQTDLVALSRYFSLLMMRNITSDGYVIEDPTSPGVFSAPGCVIAAPSYP ANTPGVDQDYVFNWVRDGAITAIEIALAGLLPIPGGVLPSLVDYVNFAALCQANAKNSDTVTLGHACFTITGEVRPWSEQ NDGPAIQSIAILTLFDQLDGATQTIAKQLVQANLAYLLEVYQNKTTNLWEEYEGYSFFARAVQLRFFREISTNTIGIAVP AGVAGAISWLESQLATHWNGQLYVSILDALEQAGYDANIDIVSSVCYGGIEPTDTKLLATAAILRRQWADPSSSNYYPVN GADAAKGLGPLFGRYPGDHYDGDVAAPVAGGHPWALCTANFAEFQYRLANAIDASGAIPLDQFSEPFFAEMGLGASSSAA DASAALRASSDAMLRAIVYHSDYYELSEQFDGTVGYEKSVRNLTWSYASFLSAVRARAAAPATKSKPRNSRGPKS
Sequences:
>Translated_475_residues MTVALWSQSMTGANPAHIGANAPTVKPRPAFAQTDLVALSRYFSLLMMRNITSDGYVIEDPTSPGVFSAPGCVIAAPSYP ANTPGVDQDYVFNWVRDGAITAIEIALAGLLPIPGGVLPSLVDYVNFAALCQANAKNSDTVTLGHACFTITGEVRPWSEQ NDGPAIQSIAILTLFDQLDGATQTIAKQLVQANLAYLLEVYQNKTTNLWEEYEGYSFFARAVQLRFFREISTNTIGIAVP AGVAGAISWLESQLATHWNGQLYVSILDALEQAGYDANIDIVSSVCYGGIEPTDTKLLATAAILRRQWADPSSSNYYPVN GADAAKGLGPLFGRYPGDHYDGDVAAPVAGGHPWALCTANFAEFQYRLANAIDASGAIPLDQFSEPFFAEMGLGASSSAA DASAALRASSDAMLRAIVYHSDYYELSEQFDGTVGYEKSVRNLTWSYASFLSAVRARAAAPATKSKPRNSRGPKS >Mature_474_residues TVALWSQSMTGANPAHIGANAPTVKPRPAFAQTDLVALSRYFSLLMMRNITSDGYVIEDPTSPGVFSAPGCVIAAPSYPA NTPGVDQDYVFNWVRDGAITAIEIALAGLLPIPGGVLPSLVDYVNFAALCQANAKNSDTVTLGHACFTITGEVRPWSEQN DGPAIQSIAILTLFDQLDGATQTIAKQLVQANLAYLLEVYQNKTTNLWEEYEGYSFFARAVQLRFFREISTNTIGIAVPA GVAGAISWLESQLATHWNGQLYVSILDALEQAGYDANIDIVSSVCYGGIEPTDTKLLATAAILRRQWADPSSSNYYPVNG ADAAKGLGPLFGRYPGDHYDGDVAAPVAGGHPWALCTANFAEFQYRLANAIDASGAIPLDQFSEPFFAEMGLGASSSAAD ASAALRASSDAMLRAIVYHSDYYELSEQFDGTVGYEKSVRNLTWSYASFLSAVRARAAAPATKSKPRNSRGPKS
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322092, Length=179, Percent_Identity=29.608938547486, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.3
Molecular weight: Translated: 50778; Mature: 50647
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVALWSQSMTGANPAHIGANAPTVKPRPAFAQTDLVALSRYFSLLMMRNITSDGYVIED CEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC PTSPGVFSAPGCVIAAPSYPANTPGVDQDYVFNWVRDGAITAIEIALAGLLPIPGGVLPS CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH LVDYVNFAALCQANAKNSDTVTLGHACFTITGEVRPWSEQNDGPAIQSIAILTLFDQLDG HHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATQTIAKQLVQANLAYLLEVYQNKTTNLWEEYEGYSFFARAVQLRFFREISTNTIGIAVP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEC AGVAGAISWLESQLATHWNGQLYVSILDALEQAGYDANIDIVSSVCYGGIEPTDTKLLAT CCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH AAILRRQWADPSSSNYYPVNGADAAKGLGPLFGRYPGDHYDGDVAAPVAGGHPWALCTAN HHHHHHHCCCCCCCCEECCCCCHHHHCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEECH FAEFQYRLANAIDASGAIPLDQFSEPFFAEMGLGASSSAADASAALRASSDAMLRAIVYH HHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH SDYYELSEQFDGTVGYEKSVRNLTWSYASFLSAVRARAAAPATKSKPRNSRGPKS CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVALWSQSMTGANPAHIGANAPTVKPRPAFAQTDLVALSRYFSLLMMRNITSDGYVIED EEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC PTSPGVFSAPGCVIAAPSYPANTPGVDQDYVFNWVRDGAITAIEIALAGLLPIPGGVLPS CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH LVDYVNFAALCQANAKNSDTVTLGHACFTITGEVRPWSEQNDGPAIQSIAILTLFDQLDG HHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATQTIAKQLVQANLAYLLEVYQNKTTNLWEEYEGYSFFARAVQLRFFREISTNTIGIAVP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEC AGVAGAISWLESQLATHWNGQLYVSILDALEQAGYDANIDIVSSVCYGGIEPTDTKLLAT CCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH AAILRRQWADPSSSNYYPVNGADAAKGLGPLFGRYPGDHYDGDVAAPVAGGHPWALCTAN HHHHHHHCCCCCCCCEECCCCCHHHHCCCHHHHCCCCCCCCCCEECCCCCCCCEEEEECH FAEFQYRLANAIDASGAIPLDQFSEPFFAEMGLGASSSAADASAALRASSDAMLRAIVYH HHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHH SDYYELSEQFDGTVGYEKSVRNLTWSYASFLSAVRARAAAPATKSKPRNSRGPKS CHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; beta-D-glucuronoside
Specific reaction: H2O + a beta-D-glucuronoside = D-glucuronate + an alcohol
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA