| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361156
Identifier: 86361156
GI number: 86361156
Start: 479437
End: 479985
Strand: Direct
Name: 86361156
Synonym: RHE_PF00426
Alternate gene names: NA
Gene position: 479437-479985 (Clockwise)
Preceding gene: 86361155
Following gene: 86361158
Centisome position: 74.62
GC content: 62.66
Gene sequence:
>549_bases ATGAATGATTGTGAATGGGAGCGGCGTAAAGTGACGGCAGGAAGAGTTTTCAGCGGGGTGTGGCGTTTGCCTCTTATCGC GCCCTTCGTCCTCGCAACCATCCTATATTCACGTCATGCCAGCGCGGCGCCCGAGGACGGACAATGGTCGCAAGATCCGG GCAGCCATTGCAGCTTCGTAGCGCCGGCTTCCCTGACTGCCGGACCGACCTTCTGGATCGGCGCCTGCGTCGACGGCAAG GCGTCGGGGGAAGGAATGCTGCGCCGCCGGGATGGCGACAAGGCCGGACCGGCCTTCTTCGGCAGGATGAAGGACGGGAT TCCCGAGATCGGGATCATCGATCTCGCCGATGGATACAGGGCGGGCAGTTTCAGCGATGGCGACATCGGCGGGCAAGCCG ATCCCGATCCGCAGGACAGGATAGACGCCTTTCGTATCGCGGCCAAGGCTGCGCGGCTCGCCAGAGCCAAATATGCGGCC GAGAAGAACGCGGGATCCGCGCGCCACTATGAGGAGCTTGCCCAGACGTTGGAACAGCAGACCGATTGA
Upstream 100 bases:
>100_bases GTTCGTGGCCGGCGGATTGTGAGATCCCGACCGCTTGCCGTCCCGTCGACAATGATGCATTGCTCGCGGCTTGGCCTATT GGCTTCTCACGGCAAATGCA
Downstream 100 bases:
>100_bases ATGACAGGCGTATGCGCGAGTCGCTGCAGAGCCGATCCAGCGCTTCGCCCTGTCGCAGGCCAATTACCCGAGATGGGGCC GGCTCACCCGGCGACCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWSQDPGSHCSFVAPASLTAGPTFWIGACVDGK ASGEGMLRRRDGDKAGPAFFGRMKDGIPEIGIIDLADGYRAGSFSDGDIGGQADPDPQDRIDAFRIAAKAARLARAKYAA EKNAGSARHYEELAQTLEQQTD
Sequences:
>Translated_182_residues MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWSQDPGSHCSFVAPASLTAGPTFWIGACVDGK ASGEGMLRRRDGDKAGPAFFGRMKDGIPEIGIIDLADGYRAGSFSDGDIGGQADPDPQDRIDAFRIAAKAARLARAKYAA EKNAGSARHYEELAQTLEQQTD >Mature_182_residues MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWSQDPGSHCSFVAPASLTAGPTFWIGACVDGK ASGEGMLRRRDGDKAGPAFFGRMKDGIPEIGIIDLADGYRAGSFSDGDIGGQADPDPQDRIDAFRIAAKAARLARAKYAA EKNAGSARHYEELAQTLEQQTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19601; Mature: 19601
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWSQDPGSHCSFV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE APASLTAGPTFWIGACVDGKASGEGMLRRRDGDKAGPAFFGRMKDGIPEIGIIDLADGYR CCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCC AGSFSDGDIGGQADPDPQDRIDAFRIAAKAARLARAKYAAEKNAGSARHYEELAQTLEQQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC TD CC >Mature Secondary Structure MNDCEWERRKVTAGRVFSGVWRLPLIAPFVLATILYSRHASAAPEDGQWSQDPGSHCSFV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEE APASLTAGPTFWIGACVDGKASGEGMLRRRDGDKAGPAFFGRMKDGIPEIGIIDLADGYR CCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCC AGSFSDGDIGGQADPDPQDRIDAFRIAAKAARLARAKYAAEKNAGSARHYEELAQTLEQQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC TD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA