| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361154
Identifier: 86361154
GI number: 86361154
Start: 478270
End: 478743
Strand: Direct
Name: 86361154
Synonym: RHE_PF00424
Alternate gene names: NA
Gene position: 478270-478743 (Clockwise)
Preceding gene: 86361153
Following gene: 86361155
Centisome position: 74.44
GC content: 55.91
Gene sequence:
>474_bases GTGGCTGCGATCGAATTTGCGATCCTGGCCCTGCCGCTCTTCATCATGATCTTCGGCATCATCGAAGTGTCGCTGATGTT CTTCGTCAACTCCTCGCTGGACGCTTCCGTTCATAAAATCTCCCGGATGATCCGTACCGGCGAGGTGGCGTCATCGAAGA TCACACTGGCCACTTTCAAGAGCAAAATTTGCGACGACATGCTTCTGTCCTTCAGTTGCTCGAGTGGTCTCGTCGTCAAA GTCAACGTGCTTTCCGACCTGTCGTCCGCCACTCGCGCCGATCCGATCGACGACAGCGGCAATCTCGCCGTCACCGAGAC TTATGATATCGGCAAGGGCAGCGATTACATTCTGGTGCAGGCGTTTCTGCCCTGGGCAGCCTCCGTCAATTTCTTCAGCC TGTCGAGCGCCAAACTTTCGGACGGCCGCTATCTCCTTGGGTCCTCAGCGCTGTTTCGCAATGAGCCCTTCTGA
Upstream 100 bases:
>100_bases CGACGCTCTTCACTCAATATCTCTCTTCCGTCCGGCTGACCCAATGACCGCACGAAACCGCTTTGCACTGCTTCGCCGCC TGCTCGGCGATCGCAAGGGG
Downstream 100 bases:
>100_bases CATGATCACGAAACGGAACCTCGCCCTTCTCAGCCTCACCCGGTCCTGCATCGGTCACCTCGCATGCGACCGCACGGCCG CTTCGGGCGTGGAATTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like Protein; TadE-Like; TadG-Like Pilus Assembly Protein; Transmembrane Protein; Signal Peptide; Tade Family Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVK VNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF
Sequences:
>Translated_157_residues MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVK VNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF >Mature_156_residues AAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVKV NVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16952; Mature: 16821
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHH SKICDDMLLSFSCSSGLVVKVNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQ HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEE AFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF EECCHHCCCCEEEECCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure AAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHH SKICDDMLLSFSCSSGLVVKVNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQ HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEE AFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF EECCHHCCCCEEEECCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA