Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361154

Identifier: 86361154

GI number: 86361154

Start: 478270

End: 478743

Strand: Direct

Name: 86361154

Synonym: RHE_PF00424

Alternate gene names: NA

Gene position: 478270-478743 (Clockwise)

Preceding gene: 86361153

Following gene: 86361155

Centisome position: 74.44

GC content: 55.91

Gene sequence:

>474_bases
GTGGCTGCGATCGAATTTGCGATCCTGGCCCTGCCGCTCTTCATCATGATCTTCGGCATCATCGAAGTGTCGCTGATGTT
CTTCGTCAACTCCTCGCTGGACGCTTCCGTTCATAAAATCTCCCGGATGATCCGTACCGGCGAGGTGGCGTCATCGAAGA
TCACACTGGCCACTTTCAAGAGCAAAATTTGCGACGACATGCTTCTGTCCTTCAGTTGCTCGAGTGGTCTCGTCGTCAAA
GTCAACGTGCTTTCCGACCTGTCGTCCGCCACTCGCGCCGATCCGATCGACGACAGCGGCAATCTCGCCGTCACCGAGAC
TTATGATATCGGCAAGGGCAGCGATTACATTCTGGTGCAGGCGTTTCTGCCCTGGGCAGCCTCCGTCAATTTCTTCAGCC
TGTCGAGCGCCAAACTTTCGGACGGCCGCTATCTCCTTGGGTCCTCAGCGCTGTTTCGCAATGAGCCCTTCTGA

Upstream 100 bases:

>100_bases
CGACGCTCTTCACTCAATATCTCTCTTCCGTCCGGCTGACCCAATGACCGCACGAAACCGCTTTGCACTGCTTCGCCGCC
TGCTCGGCGATCGCAAGGGG

Downstream 100 bases:

>100_bases
CATGATCACGAAACGGAACCTCGCCCTTCTCAGCCTCACCCGGTCCTGCATCGGTCACCTCGCATGCGACCGCACGGCCG
CTTCGGGCGTGGAATTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadG; TadE-Like Protein; TadE-Like; TadG-Like Pilus Assembly Protein; Transmembrane Protein; Signal Peptide; Tade Family Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVK
VNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF

Sequences:

>Translated_157_residues
MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVK
VNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF
>Mature_156_residues
AAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFKSKICDDMLLSFSCSSGLVVKV
NVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQAFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16952; Mature: 16821

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHH
SKICDDMLLSFSCSSGLVVKVNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQ
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEE
AFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF
EECCHHCCCCEEEECCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
AAIEFAILALPLFIMIFGIIEVSLMFFVNSSLDASVHKISRMIRTGEVASSKITLATFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHH
SKICDDMLLSFSCSSGLVVKVNVLSDLSSATRADPIDDSGNLAVTETYDIGKGSDYILVQ
HHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEE
AFLPWAASVNFFSLSSAKLSDGRYLLGSSALFRNEPF
EECCHHCCCCEEEECCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA