BacMap

Definition	Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession	NC_007766
Length	642,517

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The map label for this gene is gabDf2

Identifier: 86361094

GI number: 86361094

Start: 411689

End: 413176

Strand: Reverse

Name: gabDf2

Synonym: RHE_PF00364

Alternate gene names: 86361094

Gene position: 413176-411689 (Counterclockwise)

Preceding gene: 86361095

Following gene: 86361093

Centisome position: 64.31

GC content: 63.64

Gene sequence:

>1488_bases
ATGAACATCAACAAGACTTCTCCAAATCTAGACTACGATCCCTTCGCGCTCAACTCGTTTTCCCGCGGCCTCTATATTGG
CGGGGTCTGGCGGCCTGCAGGCGGCGAGGGTTGGATCCAGGTGATCGATCCCGCGACGGAGGTCGTCATTGCCGCCGTGC
CGGATGCGGGCCTTGCGGATGCGGCAGCCGCGGTGGATGCCGCGGCGAGCGCCGCGGAGAGCTGGCGCGAGACTGCGCCG
AGGAAGCGGTCCGAGATACTACGCCGCTGCTTCGAACTTATGGTGGAGCGCTCCGAAACGCTTGCCAGGCTCATTTGTCT
CGAAAACGGAAAAGCGTTGCGCGACGCGCGCGGCGAGGTGGCCTATGCGGCGGAGTTCTTTCGGTGGAACGCTGAGGAGG
CGGTGCGCATCTCGGGTGAGTTCGGCATTGCGCCGGCCGGTGGAAACCGGATCGTCGTCGATTACCAGCCTATCGGCGTC
TGCGTTCTCATCACACCCTGGAATTTCCCGGCCGCCATGGCGACCCGCAAGATTGCGCCCGCCCTTGCCGCCGGCTGCAC
CGTCATCCTGAAGCCGGCGAGCGAGACTCCGTTGACGGCCTATGCGCTTGCGGCTCTCTACGAGGAGGCCGGGGTGCCGC
GGGGCGTCGTGAACGTGATGACGACATCGACGCCTGGCCCTGTCATCGCCGCCATGCTGGCCGACCCGCGGGTGCGAAAA
CTCTCCTTCACAGGCTCGACGGGCGTCGGTCGCACGCTTCTGGCGGAAGCGGCGAAAAATGTGATCTCCTGCTCGATGGA
ACTCGGCGGCAACGCGCCTTTCATCGTATTCGACGACGCCGACATTGACGCGGCGATCGAGGGGCTGATGGTGGCGAAAA
TGCGCAATGCCGGTGAGGCCTGCACGGCTGCGAACCGCATTTATGTCCAATCCGGTATCCACGATGACTTCGCGGAAAAA
TTTGCACGACGCATGGCCGCCCTCAGGGTCGGCCCCGGCGTAAATGCGGATACCGCATGCGGTCCGATGATCACACGCAA
GGCGGTGGAGAAGATCGAGCGCCTGGTTGCGGACGCCATTTCCCGCGGCGCGCGCGCGCTCTGCGGCGGACGAACATTGG
CGGGACGGGGCTTTTTCTATCCGCCGACGGTGCTTGTCGATGTTTCCCCGGCCGCGGACTTGGGCTGTGAGGAGATTTTC
GGTCCTGTTGCGCCGCTCTATCGTTTCGAGACCGAGGCAGAGGTCATTGCTGCCGCGAACAATACGGAGTATGGCCTCGC
CGCCTACATCTATACCCGCGACATCGGCCGGGGCTTGCGCGTCGCCTCAAAGGTCGAGGCGGGCATGATCGCGCTCAATC
GAGGACTGGTCTCCGATCCCGCTGCCCCCTTTGGCGGCGTGAAGCAGAGCGGCCTCGGACGTGAAGGAGGGCAGCATCAC
GGAATCGCAGAGTTCATGGAAGCCAAGTACATTGCCACAAGCTTCTGA

Upstream 100 bases:

>100_bases
ATAATCCACGGCAGCTCGATTCAGCCGCCATGCGGGGCCTGTTGCGGGCAGCCTATGACGGCGACCTTGCCGCTTCCGCC
CTCTGAACCGGGAAATCATC

Downstream 100 bases:

>100_bases
GGGGGAGCCCGTGGCCGTCGATCCTTTCCGCACTCGTGACCATGTCACGGATTTCGACGAGATTGTCGACGATATCCGTG
CCCGCAGCCTTGCGACCCGG

Product: succinate-semialdehyde dehydrogenase protein

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLADAAAAVDAAASAAESWRETAP
RKRSEILRRCFELMVERSETLARLICLENGKALRDARGEVAYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGV
CVLITPWNFPAAMATRKIAPALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEACTAANRIYVQSGIHDDFAEK
FARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAISRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIF
GPVAPLYRFETEAEVIAAANNTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
GIAEFMEAKYIATSF

Sequences:

>Translated_495_residues
MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLADAAAAVDAAASAAESWRETAP
RKRSEILRRCFELMVERSETLARLICLENGKALRDARGEVAYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGV
CVLITPWNFPAAMATRKIAPALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEACTAANRIYVQSGIHDDFAEK
FARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAISRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIF
GPVAPLYRFETEAEVIAAANNTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
GIAEFMEAKYIATSF
>Mature_495_residues
MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLADAAAAVDAAASAAESWRETAP
RKRSEILRRCFELMVERSETLARLICLENGKALRDARGEVAYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGV
CVLITPWNFPAAMATRKIAPALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEACTAANRIYVQSGIHDDFAEK
FARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAISRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIF
GPVAPLYRFETEAEVIAAANNTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
GIAEFMEAKYIATSF

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=473, Percent_Identity=48.8372093023256, Blast_Score=405, Evalue=1e-113,
Organism=Homo sapiens, GI25777721, Length=486, Percent_Identity=47.3251028806584, Blast_Score=396, Evalue=1e-110,
Organism=Homo sapiens, GI21614513, Length=502, Percent_Identity=36.4541832669323, Blast_Score=287, Evalue=1e-77,
Organism=Homo sapiens, GI25777724, Length=476, Percent_Identity=37.3949579831933, Blast_Score=287, Evalue=2e-77,
Organism=Homo sapiens, GI25777730, Length=475, Percent_Identity=36.6315789473684, Blast_Score=286, Evalue=4e-77,
Organism=Homo sapiens, GI115387104, Length=456, Percent_Identity=36.4035087719298, Blast_Score=285, Evalue=1e-76,
Organism=Homo sapiens, GI153266822, Length=479, Percent_Identity=36.1169102296451, Blast_Score=281, Evalue=8e-76,
Organism=Homo sapiens, GI12007648, Length=462, Percent_Identity=35.9307359307359, Blast_Score=281, Evalue=1e-75,
Organism=Homo sapiens, GI238814322, Length=481, Percent_Identity=35.5509355509356, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI21361176, Length=476, Percent_Identity=35.7142857142857, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI25777732, Length=484, Percent_Identity=35.7438016528926, Blast_Score=272, Evalue=5e-73,
Organism=Homo sapiens, GI25777728, Length=418, Percent_Identity=38.5167464114833, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI25777726, Length=477, Percent_Identity=33.7526205450734, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI25952152, Length=455, Percent_Identity=33.6263736263736, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI310128093, Length=471, Percent_Identity=29.723991507431, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI188035924, Length=471, Percent_Identity=29.723991507431, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI310128103, Length=471, Percent_Identity=29.723991507431, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI11095441, Length=478, Percent_Identity=27.8242677824268, Blast_Score=185, Evalue=8e-47,
Organism=Homo sapiens, GI301500698, Length=261, Percent_Identity=36.0153256704981, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI310128091, Length=471, Percent_Identity=28.0254777070064, Blast_Score=168, Evalue=9e-42,
Organism=Homo sapiens, GI223972651, Length=467, Percent_Identity=29.5503211991435, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI310128089, Length=335, Percent_Identity=29.2537313432836, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI206597441, Length=439, Percent_Identity=26.1958997722096, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI206597439, Length=439, Percent_Identity=26.1958997722096, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI22907049, Length=439, Percent_Identity=26.1958997722096, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI310128097, Length=249, Percent_Identity=31.7269076305221, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4557303, Length=327, Percent_Identity=27.82874617737, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI73466520, Length=327, Percent_Identity=27.82874617737, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI238859541, Length=449, Percent_Identity=25.3897550111359, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI25777736, Length=449, Percent_Identity=25.3897550111359, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI25777734, Length=449, Percent_Identity=25.3897550111359, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI223972653, Length=467, Percent_Identity=27.4089935760171, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI310128095, Length=303, Percent_Identity=28.3828382838284, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI4502043, Length=371, Percent_Identity=26.9541778975741, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI238814371, Length=371, Percent_Identity=26.9541778975741, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI71773324, Length=330, Percent_Identity=27.5757575757576, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI73695881, Length=341, Percent_Identity=26.3929618768328, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI73695879, Length=341, Percent_Identity=26.3929618768328, Blast_Score=119, Evalue=9e-27,
Organism=Homo sapiens, GI310128087, Length=298, Percent_Identity=30.5369127516779, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI310128099, Length=246, Percent_Identity=30.4878048780488, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI310128101, Length=246, Percent_Identity=30.4878048780488, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI1789015, Length=474, Percent_Identity=50.6329113924051, Blast_Score=477, Evalue=1e-136,
Organism=Escherichia coli, GI1787684, Length=470, Percent_Identity=37.0212765957447, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI87081896, Length=466, Percent_Identity=37.7682403433476, Blast_Score=295, Evalue=4e-81,
Organism=Escherichia coli, GI87081926, Length=445, Percent_Identity=35.2808988764045, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787715, Length=449, Percent_Identity=36.0801781737194, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1786504, Length=465, Percent_Identity=37.2043010752688, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1787558, Length=477, Percent_Identity=33.9622641509434, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=34.7736625514403, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1787250, Length=457, Percent_Identity=31.2910284463895, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788042, Length=463, Percent_Identity=29.1576673866091, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1787653, Length=320, Percent_Identity=25.9375, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=44.206008583691, Blast_Score=372, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI133930964, Length=503, Percent_Identity=37.1769383697813, Blast_Score=300, Evalue=9e-82,
Organism=Caenorhabditis elegans, GI17562198, Length=484, Percent_Identity=37.1900826446281, Blast_Score=292, Evalue=3e-79,
Organism=Caenorhabditis elegans, GI25144435, Length=481, Percent_Identity=37.006237006237, Blast_Score=281, Evalue=5e-76,
Organism=Caenorhabditis elegans, GI32564736, Length=419, Percent_Identity=38.1861575178998, Blast_Score=260, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI25143876, Length=445, Percent_Identity=33.4831460674157, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI25143874, Length=445, Percent_Identity=33.4831460674157, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71995606, Length=444, Percent_Identity=35.8108108108108, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17551164, Length=499, Percent_Identity=32.6653306613226, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71995613, Length=401, Percent_Identity=35.1620947630923, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115534176, Length=457, Percent_Identity=28.8840262582057, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71986308, Length=456, Percent_Identity=29.3859649122807, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI25146394, Length=428, Percent_Identity=28.7383177570093, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI32566756, Length=428, Percent_Identity=28.7383177570093, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI25146391, Length=428, Percent_Identity=28.7383177570093, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17564084, Length=350, Percent_Identity=30.5714285714286, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17534447, Length=462, Percent_Identity=26.6233766233766, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI32564151, Length=431, Percent_Identity=26.2180974477958, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115532534, Length=375, Percent_Identity=26.9333333333333, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71990744, Length=301, Percent_Identity=26.578073089701, Blast_Score=83, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6319478, Length=495, Percent_Identity=43.8383838383838, Blast_Score=413, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6320917, Length=459, Percent_Identity=39.2156862745098, Blast_Score=306, Evalue=3e-84,
Organism=Saccharomyces cerevisiae, GI6324950, Length=456, Percent_Identity=37.0614035087719, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6325196, Length=471, Percent_Identity=36.9426751592357, Blast_Score=289, Evalue=8e-79,
Organism=Saccharomyces cerevisiae, GI6323822, Length=488, Percent_Identity=35.4508196721311, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6323821, Length=485, Percent_Identity=34.4329896907216, Blast_Score=255, Evalue=1e-68,
Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=26.6247379454927, Blast_Score=173, Evalue=6e-44,
Organism=Saccharomyces cerevisiae, GI6321826, Length=486, Percent_Identity=27.3662551440329, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323757, Length=329, Percent_Identity=26.1398176291793, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281362580, Length=470, Percent_Identity=44.6808510638298, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI62472918, Length=470, Percent_Identity=44.6808510638298, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI62472926, Length=470, Percent_Identity=44.6808510638298, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI62472936, Length=470, Percent_Identity=44.6808510638298, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI21356737, Length=470, Percent_Identity=44.6808510638298, Blast_Score=421, Evalue=1e-118,
Organism=Drosophila melanogaster, GI24650465, Length=483, Percent_Identity=37.4741200828157, Blast_Score=298, Evalue=8e-81,
Organism=Drosophila melanogaster, GI24585660, Length=505, Percent_Identity=34.8514851485148, Blast_Score=291, Evalue=8e-79,
Organism=Drosophila melanogaster, GI20129399, Length=494, Percent_Identity=35.82995951417, Blast_Score=277, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24666674, Length=461, Percent_Identity=28.1995661605206, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24638876, Length=483, Percent_Identity=28.7784679089027, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24638878, Length=483, Percent_Identity=28.7784679089027, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI281360299, Length=444, Percent_Identity=25.4504504504505, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360297, Length=444, Percent_Identity=25.4504504504505, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360295, Length=444, Percent_Identity=25.4504504504505, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24586250, Length=444, Percent_Identity=25.4504504504505, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281360301, Length=445, Percent_Identity=25.8426966292135, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI45552499, Length=444, Percent_Identity=25, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281360303, Length=444, Percent_Identity=25, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24668425, Length=455, Percent_Identity=23.956043956044, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24668417, Length=455, Percent_Identity=23.956043956044, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24668413, Length=455, Percent_Identity=23.956043956044, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28571806, Length=487, Percent_Identity=25.4620123203285, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571802, Length=487, Percent_Identity=25.4620123203285, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571800, Length=487, Percent_Identity=25.4620123203285, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571798, Length=487, Percent_Identity=25.4620123203285, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571796, Length=487, Percent_Identity=25.4620123203285, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28571794, Length=487, Percent_Identity=25.4620123203285, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28574525, Length=455, Percent_Identity=22.6373626373626, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI281360293, Length=261, Percent_Identity=26.0536398467433, Blast_Score=76, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52294; Mature: 52294

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLAD
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCHH
AAAAVDAAASAAESWRETAPRKRSEILRRCFELMVERSETLARLICLENGKALRDARGEV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH
AYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGVCVLITPWNFPAAMATRKIAP
HHHHHHHHCCCCCEEEEECCCCEEECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHH
ALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCEEE
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEA
EEECCCCCCHHHHHHHHHHHHHEEHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCH
CTAANRIYVQSGIHDDFAEKFARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAI
HHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIFGPVAPLYRFETEAEVIAAAN
HHCHHHHHCCCEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
NTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
CCCCCEEEEEEEHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIAEFMEAKYIATSF
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MNINKTSPNLDYDPFALNSFSRGLYIGGVWRPAGGEGWIQVIDPATEVVIAAVPDAGLAD
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCCHH
AAAAVDAAASAAESWRETAPRKRSEILRRCFELMVERSETLARLICLENGKALRDARGEV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCH
AYAAEFFRWNAEEAVRISGEFGIAPAGGNRIVVDYQPIGVCVLITPWNFPAAMATRKIAP
HHHHHHHHCCCCCEEEEECCCCEEECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHH
ALAAGCTVILKPASETPLTAYALAALYEEAGVPRGVVNVMTTSTPGPVIAAMLADPRVRK
HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCEEE
LSFTGSTGVGRTLLAEAAKNVISCSMELGGNAPFIVFDDADIDAAIEGLMVAKMRNAGEA
EEECCCCCCHHHHHHHHHHHHHEEHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCH
CTAANRIYVQSGIHDDFAEKFARRMAALRVGPGVNADTACGPMITRKAVEKIERLVADAI
HHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SRGARALCGGRTLAGRGFFYPPTVLVDVSPAADLGCEEIFGPVAPLYRFETEAEVIAAAN
HHCHHHHHCCCEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
NTEYGLAAYIYTRDIGRGLRVASKVEAGMIALNRGLVSDPAAPFGGVKQSGLGREGGQHH
CCCCCEEEEEEEHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIAEFMEAKYIATSF
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]