| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361080
Identifier: 86361080
GI number: 86361080
Start: 392308
End: 393195
Strand: Direct
Name: 86361080
Synonym: RHE_PF00350
Alternate gene names: NA
Gene position: 392308-393195 (Clockwise)
Preceding gene: 86361079
Following gene: 86361081
Centisome position: 61.06
GC content: 58.9
Gene sequence:
>888_bases ATGGCGTCTTTTCGGAGAATCCGGCGCAGTGCAGGTGACAAACTGAAATCGACGAAAGGCCTTGATCCAGGCAAAGGCGG GCCTTCCATACAAGAGCGGGACGATGATCCCGCCGGGAACAGAACATTCTTCTTTAAGAAGCGTGCTCCCATCGGAGCCG AACACTGGGGAATTCGCATGAGCAAGAGCCTTTCGGAATTCAAGTATATGACCTTCGACGTCGTCGGCACGCTCATCGAT TTCGAGGGCGGTCTCAAGACCTGTCTCGCTGAGATCGCGGCCGAAACGGGAAATGAAATCGATGGCGAGCAGGCGCTCAG CCTCTATCGCGAGGCCCGCTACTCCGACGACGCCGACCTCTTTCCCGACGACCTCGTGCGTGTCTACATCGCAATCGCGC CGAAGCTCGGTCTGCCCGCCGATCGCAAATATGGCGAGCGGCTGCGGGATTCGGCGAAAAGCTGGAAGGGTTTCGCAGAC AGCACCAAAGCACTCGCAAGCCTGGCGAAAAACTACCGCCTCATTGCGATGACCAATGCCCGACGCTGGGCCTTCGCCTT CTTCGAGAAGGAGCTCGGCAATCCTTTCCATGCCGCCTTCACCGCCGACGATACCGGGACCGAGAAACCCGATCCCGCCT TCTTCGAGACGGTCTTCGCCTACATCGCATCGGAAGGCCATTCGAAGGACGATATCCTGCATGTCGCCCAGAGCCAGTAT CACGATATCGGAGTATCCAGGAAGCTCGGCGTGACCAACTGCTGGATCGAACGGCGGCATGCTGAGAAGGGTTACGGCGG CACGATCGAACCAGCCGAGTTTACGACACCCGACTATCATTTCACATCCATGGCCGGCCTTGCCGATGCCGCGGCCGCAC GCGCCTGA
Upstream 100 bases:
>100_bases CATCACGCTGGACGAGACGCTTGAGGACCCGGATGTGCGCCGGGCGTTGCGGGTCTGAGAATAGCGCCAAACGGTGAGAT TCGGTATTTTGTGCCGCTCG
Downstream 100 bases:
>100_bases CTTTTAAAACCGGATCGGGCTCGCCCTGCACTGCCGCCCGCCACAGAAGAAAAGGGGAATGAGATGAACGACAAGATCAC CAATTGGACCAGATCGGACA
Product: putative 2-haloalkanoic acid dehalogenase protein
Products: NA
Alternate protein names: HAD Family Hydrolase; 2-Haloalkanoic Acid Dehalogenase; HAD-Superfamily Hydrolase; Hydrolase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase; 2-Haloacid Halidohydrolase IVA; Haloacid Dehalogenase I; 2-Haloacid Dehalogenase Protein; 2-Haloalkanoic Acid Dehalogenase Protein; Hydrolase Of HAD Superfamily; Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MASFRRIRRSAGDKLKSTKGLDPGKGGPSIQERDDDPAGNRTFFFKKRAPIGAEHWGIRMSKSLSEFKYMTFDVVGTLID FEGGLKTCLAEIAAETGNEIDGEQALSLYREARYSDDADLFPDDLVRVYIAIAPKLGLPADRKYGERLRDSAKSWKGFAD STKALASLAKNYRLIAMTNARRWAFAFFEKELGNPFHAAFTADDTGTEKPDPAFFETVFAYIASEGHSKDDILHVAQSQY HDIGVSRKLGVTNCWIERRHAEKGYGGTIEPAEFTTPDYHFTSMAGLADAAAARA
Sequences:
>Translated_295_residues MASFRRIRRSAGDKLKSTKGLDPGKGGPSIQERDDDPAGNRTFFFKKRAPIGAEHWGIRMSKSLSEFKYMTFDVVGTLID FEGGLKTCLAEIAAETGNEIDGEQALSLYREARYSDDADLFPDDLVRVYIAIAPKLGLPADRKYGERLRDSAKSWKGFAD STKALASLAKNYRLIAMTNARRWAFAFFEKELGNPFHAAFTADDTGTEKPDPAFFETVFAYIASEGHSKDDILHVAQSQY HDIGVSRKLGVTNCWIERRHAEKGYGGTIEPAEFTTPDYHFTSMAGLADAAAARA >Mature_294_residues ASFRRIRRSAGDKLKSTKGLDPGKGGPSIQERDDDPAGNRTFFFKKRAPIGAEHWGIRMSKSLSEFKYMTFDVVGTLIDF EGGLKTCLAEIAAETGNEIDGEQALSLYREARYSDDADLFPDDLVRVYIAIAPKLGLPADRKYGERLRDSAKSWKGFADS TKALASLAKNYRLIAMTNARRWAFAFFEKELGNPFHAAFTADDTGTEKPDPAFFETVFAYIASEGHSKDDILHVAQSQYH DIGVSRKLGVTNCWIERRHAEKGYGGTIEPAEFTTPDYHFTSMAGLADAAAARA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32673; Mature: 32542
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFRRIRRSAGDKLKSTKGLDPGKGGPSIQERDDDPAGNRTFFFKKRAPIGAEHWGIRM CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCHHH SKSLSEFKYMTFDVVGTLIDFEGGLKTCLAEIAAETGNEIDGEQALSLYREARYSDDADL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC FPDDLVRVYIAIAPKLGLPADRKYGERLRDSAKSWKGFADSTKALASLAKNYRLIAMTNA CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECC RRWAFAFFEKELGNPFHAAFTADDTGTEKPDPAFFETVFAYIASEGHSKDDILHVAQSQY CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HDIGVSRKLGVTNCWIERRHAEKGYGGTIEPAEFTTPDYHFTSMAGLADAAAARA HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ASFRRIRRSAGDKLKSTKGLDPGKGGPSIQERDDDPAGNRTFFFKKRAPIGAEHWGIRM CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHCHHH SKSLSEFKYMTFDVVGTLIDFEGGLKTCLAEIAAETGNEIDGEQALSLYREARYSDDADL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC FPDDLVRVYIAIAPKLGLPADRKYGERLRDSAKSWKGFADSTKALASLAKNYRLIAMTNA CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECC RRWAFAFFEKELGNPFHAAFTADDTGTEKPDPAFFETVFAYIASEGHSKDDILHVAQSQY CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH HDIGVSRKLGVTNCWIERRHAEKGYGGTIEPAEFTTPDYHFTSMAGLADAAAARA HHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA